RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CPNE4Q96A23 557 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 INTS12Q96CB8 462 aaKnown RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 SLC25A36Q96CQ1 311 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 STARD4Q96DR4 205 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ZNF347Q96SE7 839 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 ENKD1Q9H0I2 346 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 BCO1Q9HAY6 547 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 FANCFQ9NPI8 374 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 JKAMPQ9P055 326 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 CLEC4AQ9UMR7 237 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 AURKCQ9UQB9 309 aa9.59□□□□□ -0.87
NEDD8-205ENST00000527046 DIDO1Q9BTC0 2240 aaKnown RBP9.59□□□□□ -0.87
NEDD8-205ENST00000527046 UBR5O95071 2799 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 M0R082 166 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 PLPP3O14495 311 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 OR2T1O43869 369 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 ZG16O60844 167 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 TIPRLO75663 272 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 GADD45GO95257 159 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 TP53P04637 393 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 HLA-DOBP13765 273 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 SLC16A1P53985 500 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 CSNK2A1P68400 391 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 PDK3Q15120 406 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 PDSS1Q5T2R2 415 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 TMEM211Q6ICI0 200 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 C1orf94Q6P1W5 598 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 BTLAQ7Z6A9 289 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 TUSC5Q8IXB3 177 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 GCNT2Q8N0V5 402 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 RELL2Q8NC24 303 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 OR4K5Q8NGD3 323 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF417Q8TAU3 575 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 RND1Q92730 232 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF385AQ96PM9 386 aaKnown RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 ALPK1Q96QP1 1244 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF587Q96SQ5 575 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 TM9SF2Q99805 663 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 TRIM15Q9C019 465 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 MRPL39Q9NYK5 338 aaKnown RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 KLHL13Q9P2N7 655 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 MED31Q9Y3C7 131 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 FAM32AQ9Y421 112 aaKnown RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 AP4S1Q9Y587 144 aa9.58□□□□□ -0.88
NEDD8-205ENST00000527046 MAGED1Q9Y5V3 778 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-205ENST00000527046 HCFC1P51610 2035 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 A0A1W2PNV4 684 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 ERICH4A6NGS2 130 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 EIF1BO60739 113 aaKnown RBP9.57□□□□□ -0.88
NEDD8-205ENST00000527046 SS18L1O75177 396 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-205ENST00000527046 KRT36O76013 467 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 OR7A10O76100 309 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF432O94892 652 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 IL18BPO95998 194 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 MT-ATP6P00846 226 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 GASTP01350 101 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 IFI30P13284 250 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 AGTR1P30556 359 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 UQCRC1P31930 480 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 RPS4XP62701 263 aaKnown RBP9.57□□□□□ -0.88
NEDD8-205ENST00000527046 SPIBQ01892 262 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 ZP4Q12836 540 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 SF3B4Q15427 424 aaKnown RBP eCLIP9.57□□□□□ -0.883e-15■■■■□ 24.1
NEDD8-205ENST00000527046 OTUD3Q5T2D3 398 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-205ENST00000527046 VWA1Q6PCB0 445 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 CREB3L2Q70SY1 520 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 H1FNTQ75WM6 255 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-205ENST00000527046 CHMP1BQ7LBR1 199 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 CYP4Z1Q86W10 505 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 HS3ST5Q8IZT8 346 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 SLC43A2Q8N370 569 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 ADPRHL1Q8NDY3 354 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 LILRB4Q8NHJ6 448 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 PYDC1Q8WXC3 89 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 BPIFA2Q96DR5 249 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 SGTBQ96EQ0 304 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 TXNDC15Q96J42 360 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 TNFRSF13CQ96RJ3 184 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 EPYCQ99645 322 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 UCK2Q9BZX2 261 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 CHST11Q9NPF2 352 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 TIGARQ9NQ88 270 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 PLSCR4Q9NRQ2 329 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 SELENONQ9NZV5 590 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 MCTS1Q9ULC4 181 aaKnown RBP9.57□□□□□ -0.88
NEDD8-205ENST00000527046 B3GALT5Q9Y2C3 310 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 FLVCR1Q9Y5Y0 555 aa9.57□□□□□ -0.88
NEDD8-205ENST00000527046 ZNF724A8MTY0 619 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 TNFRSF11BO00300 401 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 CLOCKO15516 846 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 TRAF3IP2O43734 574 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-205ENST00000527046 CIB2O75838 187 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 SYNGR4O95473 234 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 CST1P01037 141 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 IL2RAP01589 272 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 CRHP06850 196 aa9.56□□□□□ -0.88
NEDD8-205ENST00000527046 YES1P07947 543 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms