RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CARM1Q86X55 608 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 MEX3DQ86XN8 651 aaKnown RBP9.7□□□□□ -0.86
NEDD8-204ENST00000526430 ZPLD1Q8TCW7 415 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 MCHR1Q99705 422 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 TM9SF2Q99805 663 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 PRSS27Q9BQR3 290 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 PRDM4Q9UKN5 801 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 A4GNTQ9UNA3 340 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 CAMK2AQ9UQM7 478 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 POMPQ9Y244 141 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 SH3GLB1Q9Y371 365 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 AP4B1Q9Y6B7 739 aa9.7□□□□□ -0.86
NEDD8-204ENST00000526430 A0A0B4J2E0 115 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 A0A1B0GX12 115 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM72A0PK05 275 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ZC3H12DA2A288 527 aaKnown RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 J3KTA2 159 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 OVOL3O00110 214 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ADAMDEC1O15204 470 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 FMO6PO60774 539 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 NPIPB7O75200 414 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 NUDT14O95848 222 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 IFNA14P01570 189 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 APOBEC1P41238 236 aaKnown RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 EIF1P41567 113 aaKnown RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 CCR4P51679 360 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF41P51814 821 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 CDH12P55289 794 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 RPS4XP62701 263 aaKnown RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 VLDLRP98155 873 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 TRAP1Q12931 704 aaKnown RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ENTPD8Q5MY95 495 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 WBP2NLQ6ICG8 309 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ALPK2Q86TB3 2170 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 TMCO5AQ8N6Q1 288 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 VANGL1Q8TAA9 524 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 SLC26A7Q8TE54 656 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 RASSF5Q8WWW0 418 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 SLC38A4Q969I6 547 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 FAM162AQ96A26 154 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ASB9Q96DX5 294 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ZMYND19Q96E35 227 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 TRMT61AQ96FX7 289 aaKnown RBP9.69□□□□□ -0.86
NEDD8-204ENST00000526430 PYURFQ96I23 114 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 TPD52L3Q96J77 140 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 HSH2DQ96JZ2 352 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 ARL5BQ96KC2 179 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 SFXN2Q96NB2 322 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 UCN2Q96RP3 112 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 SHARPINQ9H0F6 387 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 COQ10BQ9H8M1 238 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 NDUFAF4Q9P032 175 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 MAGEL2Q9UJ55 1249 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 BAG5Q9UL15 447 aa9.69□□□□□ -0.86
NEDD8-204ENST00000526430 TMED7-TICAM2A0A0A6YYA0 188 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 H3BML4 177 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 LINC01387J3KSC0 135 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 HS3ST1O14792 307 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 FZD7O75084 574 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF682O95780 498 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 IMPDH2P12268 514 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ELK4P28324 431 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 CCKARP32238 428 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 CD79BP40259 229 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 YAP1P46937 504 aaKnown RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 RGS8P57771 180 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 SRSF2Q01130 221 aaKnown RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 FAM27E3Q08E93 113 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 MERTKQ12866 999 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 PIN1Q13526 163 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 LIPNQ5VXI9 398 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 CCDC121Q6ZUS5 278 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 DHFR2Q86XF0 187 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 LILRA2Q8N149 483 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 CADM2Q8N3J6 435 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 SGMS2Q8NHU3 365 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF563Q8TA94 476 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ADAMTS16Q8TE57 1224 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM234Q8WY98 164 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 WNT2BQ93097 391 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF845Q96IR2 970 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 NSMCE2Q96MF7 247 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 TUBA1CQ9BQE3 449 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 FUZQ9BT04 418 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ZNF426Q9BUY5 554 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 TRIM2Q9C040 744 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 OR11A1Q9GZK7 315 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 SLCO5A1Q9H2Y9 848 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ARMC7Q9H6L4 198 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ESRP2Q9H6T0 727 aaKnown RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 TMEM185BQ9H7F4 350 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 EVA1AQ9H8M9 152 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 MAN2C1Q9NTJ4 1040 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 ADPRHL2Q9NX46 363 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 TESQ9UGI8 421 aaKnown RBP9.68□□□□□ -0.86
NEDD8-204ENST00000526430 TMED7Q9Y3B3 224 aa9.68□□□□□ -0.86
NEDD8-204ENST00000526430 A0A087WUJ7 227 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms