RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ZNF836Q6ZNA1 936 aa20.8■□□□□ 0.92
USP47-205ENST00000525257 ZNF621Q6ZSS3 439 aa20.8■□□□□ 0.92
USP47-205ENST00000525257 VRK2Q86Y07 508 aa20.8■□□□□ 0.92
USP47-205ENST00000525257 PEX5LQ8IYB4 626 aa20.8■□□□□ 0.92
USP47-205ENST00000525257 ROPN1BQ9BZX4 212 aaPredicted RBP20.8■□□□□ 0.92
USP47-205ENST00000525257 RAB1BQ9H0U4 201 aa20.8■□□□□ 0.92
USP47-205ENST00000525257 ROPN1Q9HAT0 212 aaPredicted RBP20.8■□□□□ 0.92
USP47-205ENST00000525257 CRNNQ9UBG3 495 aaPredicted RBP20.8■□□□□ 0.92
USP47-205ENST00000525257 ARPC4-TTLL3A0A0A6YYG9 625 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 CDHR4A6H8M9 788 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 UPK3AO75631 287 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 STAMBPO95630 424 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 UFM1P61960 85 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 PRAMEF8Q5VWM4 474 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 PRAMEF7Q5VXH5 474 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 SORT1Q99523 831 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 NELFAQ9H3P2 528 aa20.79■□□□□ 0.92
USP47-205ENST00000525257 A8MVM7 634 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 VAMP5O95183 116 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 PGRP06401 933 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 DAOP14920 347 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 PAX7P23759 505 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 IL2RGP31785 369 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 ACAA2P42765 397 aaKnown RBP20.78■□□□□ 0.92
USP47-205ENST00000525257 COPZ1P61923 177 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 TXNL4AP83876 142 aaKnown RBP20.78■□□□□ 0.92
USP47-205ENST00000525257 C1orf140Q5VVS0 124 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 WBP2NLQ6ICG8 309 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 MYPOPQ86VE0 399 aaPredicted RBP20.78■□□□□ 0.92
USP47-205ENST00000525257 EPHX4Q8IUS5 362 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 OR4F15Q8NGB8 312 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 OR52P1PQ8NH57 321 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 C1orf159Q96HA4 380 aa20.78■□□□□ 0.92
USP47-205ENST00000525257 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.78■□□□□ 0.92
USP47-205ENST00000525257 OR6C65A6NJZ3 312 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 hCG_2039718K7EN88 272 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 IGLV1-44P01699 117 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 CELA3BP08861 270 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 ALDOCP09972 364 aaKnown RBP20.77■□□□□ 0.92
USP47-205ENST00000525257 IL12AP29459 219 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 THBS4P35443 961 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 SLC1A6P48664 564 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 ROR2Q01974 943 aaKnown RBP20.77■□□□□ 0.92
USP47-205ENST00000525257 HGFACQ04756 655 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 MAPK11Q15759 364 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 C3orf36Q3SXR2 165 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 LIN52Q52LA3 116 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 ZCCHC24Q8N2G6 241 aaKnown RBP20.77■□□□□ 0.92
USP47-205ENST00000525257 SVOPLQ8N434 492 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 MAGEE2Q8TD90 523 aaPredicted RBP20.77■□□□□ 0.92
USP47-205ENST00000525257 ZNF317Q96PQ6 595 aaPredicted RBP20.77■□□□□ 0.92
USP47-205ENST00000525257 OR52E6Q96RD3 313 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 RASD1Q9Y272 281 aa20.77■□□□□ 0.92
USP47-205ENST00000525257 TCF21O43680 179 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 PRG2P13727 222 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 NCF2P19878 526 aaPredicted RBP20.76■□□□□ 0.91
USP47-205ENST00000525257 GIFP27352 417 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 APEX1P27695 318 aaKnown RBP20.76■□□□□ 0.91
USP47-205ENST00000525257 CHN2P52757 468 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 ZSWIM7Q19AV6 140 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 LRRC34Q8IZ02 419 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 KDM8Q8N371 416 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 NUP37Q8NFH4 326 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 MEAF6Q9HAF1 191 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 AIG1Q9NVV5 245 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 P2RX2Q9UBL9 471 aa20.76■□□□□ 0.91
USP47-205ENST00000525257 ZNF443Q9Y2A4 671 aaPredicted RBP20.76■□□□□ 0.91
USP47-205ENST00000525257 BIRC5O15392 142 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 IGKV3-15P01624 115 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 ERCC1P07992 297 aaPredicted RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 TFPTP0C1Z6 253 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 NPR2P20594 1047 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 SRP14P37108 136 aaKnown RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 SH3BGRP55822 239 aaPredicted RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 VSNL1P62760 191 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 ARF1P84077 181 aaKnown RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 SPATA21Q7Z572 469 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 RFLNBQ8N5W9 214 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 NEU4Q8WWR8 484 aaPredicted RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 SLC25A36Q96CQ1 311 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 SNX18Q96RF0 628 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 LINC00470Q9BZP3 86 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 ZNF442Q9H7R0 627 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 MOV10Q9HCE1 1003 aaKnown RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 PNPOQ9NVS9 261 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 FBXO9Q9UK97 447 aaPredicted RBP20.75■□□□□ 0.91
USP47-205ENST00000525257 DSPPQ9NZW4 1301 aa20.75■□□□□ 0.91
USP47-205ENST00000525257 SH3PXD2BA1X283 911 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 LILRA1O75019 489 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 NPIPB7O75200 414 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 SNUPNO95149 360 aaKnown RBP20.74■□□□□ 0.91
USP47-205ENST00000525257 AHSA1O95433 338 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 KRT75O95678 551 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 BCHEP06276 602 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 TACSTD2P09758 323 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 BGNP21810 368 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 CLDN17P56750 224 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 RPS26P11Q5JNZ5 115 aaPredicted RBP20.74■□□□□ 0.91
USP47-205ENST00000525257 ATG16L1Q676U5 607 aa20.74■□□□□ 0.91
USP47-205ENST00000525257 OGFOD2Q6N063 350 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms