RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF658Q5TYW1 1059 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 REP15Q6BDI9 236 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TTC19Q6DKK2 380 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 C11orf71Q6IPW1 123 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ENPP6Q6UWR7 440 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 Q71RC1 249 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 P4HA3Q7Z4N8 544 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 SNX20Q7Z614 316 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ANKRD37Q7Z713 158 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ASPGQ86U10 573 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 LRRC6Q86X45 466 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TMEM139Q8IV31 216 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CDKL3Q8IVW4 592 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 NELFCDQ8IXH7 590 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 C17orf78Q8N4C9 275 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TMEM251Q8N6I4 163 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 NPWQ8N729 165 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 RASGEF1AQ8N9B8 481 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 NAXEQ8NCW5 288 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 MORN4Q8NDC4 146 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GPR26Q8NDV2 337 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 NFAM1Q8NET5 270 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 STEAP2Q8NFT2 490 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 IPMKQ8NFU5 416 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TTLQ8NG68 377 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OR2L3Q8NG85 312 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OR4E2Q8NGC2 313 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OR10Q1Q8NGQ4 319 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OR6K3Q8NGY3 331 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OR52N5Q8NH56 324 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 FAM172AQ8WUF8 416 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PHLDA1Q8WV24 401 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 RNF138Q8WVD3 245 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 RAD51AP1Q96B01 352 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 LRRC45Q96CN5 670 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ERP27Q96DN0 273 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TM4SF19Q96DZ7 209 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ZNF486Q96H40 463 aaPredicted RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 CYYR1Q96J86 154 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CELF6Q96J87 481 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 CFAP57Q96MR6 1250 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GAL3ST4Q96RP7 486 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PLIN2Q99541 437 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 COPS8Q99627 209 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GPA33Q99795 319 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CCDC77Q9BR77 488 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OVOL2Q9BRP0 275 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 PELOQ9BRX2 385 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 MED18Q9BUE0 208 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 POTEKPQ9BYX7 375 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GPR61Q9BZJ8 451 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 SLC39A8Q9C0K1 460 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 OR2B2Q9GZK3 357 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 RNF122Q9H9V4 155 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 KCNK13Q9HB14 408 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 CBLN4Q9NTU7 201 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 HPF1Q9NWY4 346 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TAS2R16Q9NYV7 291 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 TRPC4Q9UBN4 977 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 SH3BGRL2Q9UJC5 107 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 GRID1Q9ULK0 1009 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 RNF115Q9Y4L5 304 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 ATG4BQ9Y4P1 393 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 KIF25-AS1Q9Y6Z4 181 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 MDC1Q14676 2089 aaKnown RBP1.26□□□□□ -2.21
CD44-212ENST00000524922 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
CD44-212ENST00000524922 DYSFO75923 2080 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 MPDZO75970 2070 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 DSCAMO60469 2012 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 IGHV4-30-2A0A087WSY4 118 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 A0A087WUV0 522 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 LCE6AA0A183 80 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 A0A1W2PP18 115 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 GOLGA6L10A6NI86 522 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NPIPA2E9PIF3 369 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 F8VZ95 297 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NPIPA3F8WFD2 350 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 GOLGA6L19H0YKK7 550 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 H3BMM5 538 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TP53I11O14683 189 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ACOX3O15254 700 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HCRTR1O43613 425 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SS18L1O75177 396 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 AVILO75366 819 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SRP72O76094 671 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 SCELO95171 688 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PGM3O95394 542 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FSTL3O95633 263 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HPRP00739 348 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 AGTP01019 485 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 LHBP01229 141 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 C1QAP02745 245 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 OPN1MWP04001 364 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 IGKV3-11P04433 115 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 P04436 131 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 UQCRHP07919 91 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FHP07954 510 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SLC35G6P0C7Q6 338 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PABPC4LP0CB38 370 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 OPN1MW2P0DN77 364 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms