RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	MAPKAPK5-AS1	Q8N8E1	139 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	OR5L2	Q8NGL0	311 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	FAM110B	Q8TC76	370 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	MAGEC3	Q8TD91	643 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	TNFRSF14	Q92956	283 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	MYLPF	Q96A32	169 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	MRPL24	Q96A35	216 aa	Known RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	C18orf25	Q96B23	403 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	MTBP	Q96DY7	904 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	SCRN2	Q96FV2	425 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	ZNF274	Q96GC6	653 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	ZNF578	Q96N58	590 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	ALS2CR12	Q96Q35	445 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	TMEM246	Q9BRR3	403 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	DCTN5	Q9BTE1	182 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	SPZ1	Q9BXG8	430 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	ILKAP	Q9H0C8	392 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	FAM49A	Q9H0Q0	323 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	RAB1B	Q9H0U4	201 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	SLC25A51	Q9H1U9	297 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	IKZF5	Q9H5V7	419 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	LRRC19	Q9H756	370 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	VIPAS39	Q9H9C1	493 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	S100A14	Q9HCY8	104 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	SLC17A5	Q9NRA2	495 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	SDR39U1	Q9NRG7	319 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	LYAR	Q9NX58	379 aa	Known RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	EURL	Q9NYK6	297 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	ADAM22	Q9P0K1	906 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	UXT	Q9UBK9	157 aa	Predicted RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	ENPP5	Q9UJA9	477 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	GGA2	Q9UJY4	613 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	FBXL4	Q9UKA2	621 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	IKZF2	Q9UKS7	526 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	STARD10	Q9Y365	291 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	RBMX2	Q9Y388	322 aa	Known RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	CACNA1E	Q15878	2313 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	GCN1	Q92616	2671 aa	Known RBP	3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	PLXNA4	Q9HCM2	1894 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	AKAP13	Q12802	2813 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	LOC400499	M0QZD8	3231 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	MYH7B	A7E2Y1	1941 aa		3.68	□□□□□ -1.82
PCM1-223	ENST00000524356	CELSR3	Q9NYQ7	3312 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	PLIN4	Q96Q06	1357 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356		A0A1W2PNV4	684 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	PLSCR5	A0PG75	271 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	LILRA5	A6NI73	299 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	FAM74A7	A6NL05	159 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	TRPC5OS	A6NMA1	111 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	NDUFS6	O75380	124 aa	Known RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	OR2J3	O76001	311 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	ANXA9	O76027	345 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CLDN9	O95484	217 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	SERPIND1	P05546	499 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	SERPINE2	P07093	398 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	ALOX5	P09917	674 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CT62	P0C5K7	136 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	IGHV4-31	P0DP07	118 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	ACADS	P16219	412 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	OXTR	P30559	389 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	YWHAB	P31946	246 aa	Known RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	BRCC3	P46736	316 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	P2RY1	P47900	373 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	KCNJ3	P48549	501 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	DUSP3	P51452	185 aa	Predicted RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	NOVA1	P51513	510 aa	Known RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	GTF2A1	P52655	376 aa	Predicted RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	EFNB2	P52799	333 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	ATP12A	P54707	1039 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	RAG2	P55895	527 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	OSTN	P61366	133 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	SEC61A1	P61619	476 aa	Known RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	PSMC5	P62195	406 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CDK16	Q00536	496 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356		Q0VFX4	171 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CDH17	Q12864	832 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CYLC2	Q14093	348 aa	Predicted RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	C3AR1	Q16581	482 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	KNOP1	Q1ED39	458 aa	Known RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	MOGAT2	Q3SYC2	334 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	TMEM52B	Q4KMG9	183 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	FAM74A3	Q4VXF1	159 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CLLU1OS	Q5K130	101 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	DCAF10	Q5QP82	559 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	AGAP7P	Q5VUJ5	663 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	TCEAL6	Q6IPX3	200 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	H3F3C	Q6NXT2	135 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	LEG1	Q6P5S2	330 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	UNQ6126/PRO20091	Q6UXV3	157 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	ASCL4	Q6XD76	172 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	GPRIN3	Q6ZVF9	776 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	NET1	Q7Z628	596 aa	Predicted RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	RNF113B	Q8IZP6	322 aa	Known RBP	3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	SLC39A11	Q8N1S5	342 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	CENPS	Q8N2Z9	138 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	KBTBD3	Q8NAB2	608 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	TMEM104	Q8NE00	496 aa		3.67	□□□□□ -1.82
PCM1-223	ENST00000524356	C3orf30	Q96M34	536 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms