RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PCDHGB4Q9UN71 923 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 SLC35A3Q9Y2D2 325 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 WDR45Q9Y484 360 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 NOX1Q9Y5S8 564 aa10□□□□□ -0.81
SDCBP-211ENST00000523441 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 ARPC4-TTLL3A0A0A6YYG9 625 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 A0A0G2JMP0 313 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 A0A0X1KG70 313 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 A0A1W2PPW3 197 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 TMEM114B3SHH9 223 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 SYNGR3O43761 229 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 DNAJA2O60884 412 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CHEK2O96017 543 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 IGLV1-44P01699 117 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 GPIP06744 558 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CD79AP11912 226 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 NEFHP12036 1026 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 ACHEP22303 614 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 OMGP23515 440 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CXCR1P25024 350 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 GCAP28676 217 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CASQ1P31415 396 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CLK1P49759 484 aaKnown RBP9.99□□□□□ -0.81
SDCBP-211ENST00000523441 KHKP50053 298 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 GLIPR1L2Q4G1C9 344 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 ATAD3BQ5T9A4 648 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 GKAP1Q5VSY0 366 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-211ENST00000523441 TYW3Q6IPR3 259 aaKnown RBP9.99□□□□□ -0.81
SDCBP-211ENST00000523441 ACSM5Q6NUN0 579 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 RIBC1Q8N443 379 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-211ENST00000523441 LRRC17Q8N6Y2 441 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 OR4M2Q8NGB6 313 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 NANPQ8TBE9 248 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CCDC126Q96EE4 140 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 FUT8Q9BYC5 575 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 SLC52A3Q9NQ40 469 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 G6PC2Q9NQR9 355 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 EXD2Q9NVH0 621 aa9.99□□□□□ -0.81
SDCBP-211ENST00000523441 CRNNQ9UBG3 495 aaPredicted RBP9.99□□□□□ -0.81
SDCBP-211ENST00000523441 A0A1W2PPM1 405 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 LIPT2A6NK58 231 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CPSF4O95639 269 aaKnown RBP9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CHRM4P08173 479 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CBR1P16152 277 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 FPR2P25090 351 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 PCGF2P35227 344 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 MAGEB1P43366 347 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CLDN17P56750 224 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 KCNJ10P78508 379 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 HPCAP84074 193 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 SRSF4Q08170 494 aaKnown RBP9.98□□□□□ -0.81
SDCBP-211ENST00000523441 PRAMEF8Q5VWM4 474 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 PRAMEF7Q5VXH5 474 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CARD17Q5XLA6 110 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 TIFABQ6ZNK6 161 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 ZCCHC23Q6ZST2 131 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CREB3L2Q70SY1 520 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 RELL1Q8IUW5 271 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 CADM2Q8N3J6 435 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 FAM71CQ8NEG0 241 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 OR4A15Q8NGL6 344 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 TWIST2Q8WVJ9 160 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 PMM1Q92871 262 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 MOAP1Q96BY2 351 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 ROPN1LQ96C74 230 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 SLC25A36Q96CQ1 311 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
SDCBP-211ENST00000523441 METTL2AQ96IZ6 378 aaKnown RBP9.98□□□□□ -0.81
SDCBP-211ENST00000523441 FMO2Q99518 471 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 PKP2Q99959 881 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 DUSP26Q9BV47 211 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 TAPBPLQ9BX59 468 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 ZNF350Q9GZX5 532 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 RACGAP1Q9H0H5 632 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 OR51B6Q9H340 312 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 MS4A5Q9H3V2 200 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 C7orf69Q9H7B7 122 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.98□□□□□ -0.81
SDCBP-211ENST00000523441 ATAD3AQ9NVI7 634 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 PYCARDQ9ULZ3 195 aa9.98□□□□□ -0.81
SDCBP-211ENST00000523441 DNAJC9-AS1A6NH13 148 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 AQP7P3A6NL99 342 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 DUXAA6NLW8 204 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 TPD52L2O43399 206 aaKnown RBP9.97□□□□□ -0.81
SDCBP-211ENST00000523441 AK1P00568 194 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 IGKV3-15P01624 115 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 HLA-HP01893 362 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 PROCP04070 461 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 ANPEPP15144 967 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 FKBP2P26885 142 aaKnown RBP9.97□□□□□ -0.81
SDCBP-211ENST00000523441 MAPK1P28482 360 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 RPL3P39023 403 aaKnown RBP9.97□□□□□ -0.81
SDCBP-211ENST00000523441 HTR3AP46098 478 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 CCL8P80075 99 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 LCN2P80188 198 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 PLAURQ03405 335 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 BAMBIQ13145 260 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 NKPD1Q17RQ9 610 aa9.97□□□□□ -0.81
SDCBP-211ENST00000523441 CEACAM16Q2WEN9 425 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms