RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 LINC00470Q9BZP3 86 aa11.05□□□□□ -0.64
TOP1MT-217ENST00000523417 C12orf10Q9HB07 376 aa11.05□□□□□ -0.64
TOP1MT-217ENST00000523417 CRNNQ9UBG3 495 aaPredicted RBP11.05□□□□□ -0.64
TOP1MT-217ENST00000523417 ARPC4-TTLL3A0A0A6YYG9 625 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 UBDO15205 165 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 GPRIN2O60269 458 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 PRG2P13727 222 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 ETS2P15036 469 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 HOXB9P17482 250 aaPredicted RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 PTNP21246 168 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 THBS2P35442 1172 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 POLR2JP52435 117 aaKnown RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 DSTNP60981 165 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 FADDQ13158 208 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 RGNQ15493 299 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 TMEM249Q2WGJ8 235 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 SLC9B1Q4ZJI4 515 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 C6orf89Q6UWU4 347 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 NET1Q7Z628 596 aaPredicted RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 LSMEM1Q8N8F7 131 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 OR1K1Q8NGR3 316 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 PNPT1Q8TCS8 783 aaKnown RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 C10orf105Q8TEF2 133 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 TLCD1Q96CP7 247 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 AURKBQ96GD4 344 aaPredicted RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 TMEM19Q96HH6 336 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 RAD21L1Q9H4I0 556 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 A4GALTQ9NPC4 353 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 YAE1D1Q9NRH1 226 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 FBXO9Q9UK97 447 aaPredicted RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 ZNF443Q9Y2A4 671 aaPredicted RBP11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 PCDHB14Q9Y5E9 798 aa11.04□□□□□ -0.64
TOP1MT-217ENST00000523417 DNHD1Q96M86 4753 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 TMEM247A6NEH6 219 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 NDUFS8O00217 210 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 FRS3O43559 492 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 PDE5AO76074 875 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 ZNF432O94892 652 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 TGDSO95455 350 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 ANP32DO95626 131 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 BCHEP06276 602 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 KITP10721 976 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 EGR4Q05215 589 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 BNIP2Q12982 314 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 NXNQ6DKJ4 435 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 HMBOX1Q6NT76 420 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 ANKRD16Q6P6B7 361 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 EPGNQ6UW88 154 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 C5orf46Q6UWT4 87 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 MAVSQ7Z434 540 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 ANKRD42Q8N9B4 389 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 FAM168AQ92567 244 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 KATNB1Q9BVA0 655 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 PTDSS2Q9BVG9 487 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 PAIP1Q9H074 479 aaKnown RBP11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 RCE1Q9Y256 329 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 ATP23Q9Y6H3 246 aa11.03□□□□□ -0.64
TOP1MT-217ENST00000523417 CHD3Q12873 2000 aaKnown RBP11.02□□□□□ -0.64
TOP1MT-217ENST00000523417 IGHV1-18A0A0C4DH31 117 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 ZNF587BE7ETH6 402 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 CLIC1O00299 241 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 OR2T1O43869 369 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 IGLV1-44P01699 117 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 SH3BGRP55822 239 aaPredicted RBP11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 TBRG1Q3YBR2 411 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 CHRFAM7AQ494W8 412 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 HIKESHIQ53FT3 197 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 ZNF311Q5JNZ3 666 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 LRIF1Q5T3J3 769 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 C6orf52Q5T4I8 152 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 CYB5R2Q6BCY4 276 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 KLHL24Q6TFL4 600 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 SERPINA11Q86U17 422 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 GPAT4Q86UL3 456 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 CCDC36Q8IYA8 594 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 MIER2Q8N344 545 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 CADM2Q8N3J6 435 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 OR6S1Q8NH40 331 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 BBS10Q8TAM1 723 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 VPS33AQ96AX1 596 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 OXGR1Q96P68 337 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 SLC38A2Q96QD8 506 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 OR52B2Q96RD2 323 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 RSPO3Q9BXY4 272 aaPredicted RBP11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 MYOZ1Q9NP98 299 aaPredicted RBP11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 SLC52A3Q9NQ40 469 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 ADPRHL2Q9NX46 363 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 CDC42EP3Q9UKI2 254 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 MOKQ9UQ07 419 aa11.02□□□□□ -0.65
TOP1MT-217ENST00000523417 RTTNQ86VV8 2226 aa11.01□□□□□ -0.65
TOP1MT-217ENST00000523417 CR1P17927 2039 aa11.01□□□□□ -0.65
TOP1MT-217ENST00000523417 B9A039 149 aa11.01□□□□□ -0.65
TOP1MT-217ENST00000523417 ATP6V1G2-DDX39BF2Z307 99 aa11.01□□□□□ -0.65
TOP1MT-217ENST00000523417 UPK3AO75631 287 aa11.01□□□□□ -0.65
TOP1MT-217ENST00000523417 IGKV3-15P01624 115 aa11.01□□□□□ -0.65
TOP1MT-217ENST00000523417 CRYAAP02489 173 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms