RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 SEC22AQ96IW7 307 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 TCEANC2Q96MN5 208 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 CLCC1Q96S66 551 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 PNNQ9H307 717 aaKnown RBP3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 RBKSQ9H477 322 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZDHHC11Q9H8X9 412 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 FOLH1BQ9HBA9 442 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 LY9Q9HBG7 655 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 UGT2A1Q9Y4X1 527 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 KIF25-AS1Q9Y6Z4 181 aa3.31□□□□□ -1.88
HMGB1P1-201ENST00000522557 CHD1O14646 1710 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 PTPRGP23470 1445 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 WRNQ14191 1432 aaPredicted RBP eCLIP3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 IGLV3-10A0A075B6K4 115 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 IGHV3OR16-13A0A075B7E8 117 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 CTAGE15A4D2H0 777 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR2AG2A6NM03 316 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF780AO75290 641 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 FGF1P05230 155 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 DNAH10OSP0CZ25 163 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 RFC4P35249 363 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 GYG1P46976 350 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 IRX3P78415 501 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF45Q02386 682 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 ENPEPQ07075 957 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 SCRN3Q0VDG4 424 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 GNMTQ14749 295 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 PARP15Q460N3 678 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 FAM220AQ7Z4H9 259 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 CTAGE6Q86UF2 777 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 C11orf53Q8IXP5 236 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 CD177Q8N6Q3 437 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 BBS1Q8NFJ9 593 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR4F6Q8NGB9 312 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR52K2Q8NGK3 314 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 BRSK1Q8TDC3 778 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 SMIM14Q96QK8 99 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 PANX2Q96RD6 677 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 MBOAT4Q96T53 435 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 FMO2Q99518 471 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 MRPL45Q9BRJ2 306 aaKnown RBP3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 NUP58Q9BVL2 599 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 NMUR2Q9GZQ4 415 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 RACGAP1Q9H0H5 632 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 PPA2Q9H2U2 334 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 COPS3Q9UNS2 423 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 TARBP1Q13395 1621 aaKnown RBP3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
HMGB1P1-201ENST00000522557 CLASP1Q7Z460 1538 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ABCC10Q5T3U5 1492 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 FHAD1B1AJZ9 1412 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 PSMB11A5LHX3 300 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR5B21A6NL26 309 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 SGK1O00141 431 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 TBL1XO60907 577 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 KRT6AP02538 564 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 KRTAP1-4P0C5Y4 121 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 IL12AP29459 219 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 SHMT2P34897 504 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 FDFT1P37268 417 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 PKNOX1P55347 436 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 IGLV3-21P80748 117 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 C1orf100Q5SVJ3 147 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 MARC1Q5VT66 337 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 NANOGNBQ7Z5D8 188 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF589Q86UQ0 364 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 NRMQ8IXM6 262 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 GPD1LQ8N335 351 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 GTPBP8Q8N3Z3 284 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR10H4Q8NGA5 316 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR10G3Q8NGC4 313 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 OR52I1Q8NGK6 324 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 MAIP1Q8WWC4 291 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ELMO1Q92556 727 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 RAPGEF5Q92565 580 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 NEIL2Q969S2 332 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 CXorf40BQ96DE9 158 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ITCHQ96J02 903 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 PLEKHA8Q96JA3 519 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ZNF641Q96N77 438 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ARHGDIGQ99819 225 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 MAPKAP1Q9BPZ7 522 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 VPS37BQ9H9H4 285 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 MARCH5Q9NX47 278 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 ABCG2Q9UNQ0 655 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 KCNIP3Q9Y2W7 256 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 NEUROG3Q9Y4Z2 214 aa3.29□□□□□ -1.88
HMGB1P1-201ENST00000522557 IGLV3-22A0A075B6J6 115 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 IQANK1A0A1B0GTG1 560 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 A8MXQ7 604 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 E9PBE3 544 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 CACNG3O60359 315 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 MMP1P03956 469 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 PRKAR2BP31323 418 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 HNRNPH3P31942 346 aaKnown RBP3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 MRPL28Q13084 256 aaKnown RBP3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 PLD1Q13393 1074 aa3.28□□□□□ -1.88
HMGB1P1-201ENST00000522557 IMMTQ16891 758 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms