RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 KDELR2P33947 212 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 TAB1Q15750 504 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 TSPO2Q5TGU0 170 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 C9orf135Q5VTT2 229 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 HACD2Q6Y1H2 254 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 DEF8Q6ZN54 512 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 EPHX4Q8IUS5 362 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 WDFY1Q8IWB7 410 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 UBE2J2Q8N2K1 259 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 KISS1RQ969F8 398 aaPredicted RBP15.76■□□□□ 0.11
CLK4-211ENST00000522556 PRSS27Q9BQR3 290 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 EFCAB1Q9HAE3 211 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 SLC7A10Q9NS82 523 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 FAM53CQ9NYF3 392 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 ABCD2Q9UBJ2 740 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 PRDM4Q9UKN5 801 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 SLC7A7Q9UM01 511 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 PLEKHA6Q9Y2H5 1048 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 ARL2BPQ9Y2Y0 163 aa15.76■□□□□ 0.11
CLK4-211ENST00000522556 MYO9AB2RTY4 2548 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 CREBBPQ92793 2442 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 TRAV36DV7A0A075B6V5 113 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.75■□□□□ 0.11
CLK4-211ENST00000522556 GPR171O14626 319 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 CHP2O43745 196 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 MRPL33O75394 65 aaKnown RBP15.75■□□□□ 0.11
CLK4-211ENST00000522556 PLAUP00749 431 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 ITGA5P08648 1049 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 IL32P24001 234 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 PRDX6P30041 224 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 SELENOPP49908 381 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 PSME3P61289 254 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 FAPQ12884 760 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 FOXD4Q12950 439 aaPredicted RBP15.75■□□□□ 0.11
CLK4-211ENST00000522556 ITGADQ13349 1161 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 FAM69AQ5T7M9 428 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 FBXW9Q5XUX1 488 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 ZNF613Q6PF04 617 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 LINC00114Q6XXX2 140 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 BHLHA15Q7RTS1 189 aaPredicted RBP15.75■□□□□ 0.11
CLK4-211ENST00000522556 ARPINQ7Z6K5 226 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 VTCN1Q7Z7D3 282 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 RNF148Q8N7C7 305 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 ZNF433Q8N7K0 673 aaPredicted RBP15.75■□□□□ 0.11
CLK4-211ENST00000522556 RBM15BQ8NDT2 890 aaKnown RBP15.75■□□□□ 0.11
CLK4-211ENST00000522556 TPD52L3Q96J77 140 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 PCDHAC1Q9H158 963 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 ZNF226Q9NYT6 803 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 SLC9A8Q9Y2E8 581 aa15.75■□□□□ 0.11
CLK4-211ENST00000522556 A0A1W2PR80 420 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 CXCR6O00574 342 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 KPNA4O00629 521 aaPredicted RBP15.74■□□□□ 0.11
CLK4-211ENST00000522556 RAD51DO75771 328 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 HLA-DOBP13765 273 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 TMEM225Q6GV28 225 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 CREB3L2Q70SY1 520 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 LINGO2Q7L985 606 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 FAM156AQ8NDB6 213 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 PROX1Q92786 737 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 TMEM45BQ96B21 275 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 CMTM5Q96DZ9 223 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 CCT8L2Q96SF2 557 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 HOPXQ9BPY8 73 aaPredicted RBP15.74■□□□□ 0.11
CLK4-211ENST00000522556 SF3B5Q9BWJ5 86 aaKnown RBP15.74■□□□□ 0.11
CLK4-211ENST00000522556 ALG2Q9H553 416 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 MALT1Q9UDY8 824 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 SNX13Q9Y5W8 968 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 AKAP9Q99996 3911 aa15.74■□□□□ 0.11
CLK4-211ENST00000522556 CCDC168Q8NDH2 2452 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 TRAPPC13A5PLN9 417 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 PDLIM1O00151 329 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 IST1P53990 364 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 PIN1Q13526 163 aaPredicted RBP15.73■□□□□ 0.11
CLK4-211ENST00000522556 P2RY6Q15077 328 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 STK11Q15831 433 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 AAED1Q7RTV5 226 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 NKAIN4Q8IVV8 208 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 STEAP2Q8NFT2 490 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 SLC41A3Q96GZ6 507 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 ALKBH3Q96Q83 286 aaPredicted RBP15.73■□□□□ 0.11
CLK4-211ENST00000522556 TMEM43Q9BTV4 400 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 ZNF426Q9BUY5 554 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 EVA1AQ9H8M9 152 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 NPAP1Q9NZP6 1156 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 SELENONQ9NZV5 590 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 ST6GALNAC2Q9UJ37 374 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 BAG5Q9UL15 447 aa15.73■□□□□ 0.11
CLK4-211ENST00000522556 MS4A18H0YCH9 400 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 TRAF3IP2O43734 574 aaPredicted RBP15.72■□□□□ 0.11
CLK4-211ENST00000522556 PPP3CBP16298 524 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 GTF2E2P29084 291 aaKnown RBP15.72■□□□□ 0.11
CLK4-211ENST00000522556 YAP1P46937 504 aaKnown RBP15.72■□□□□ 0.11
CLK4-211ENST00000522556 CLDN17P56750 224 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 LSM11P83369 360 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLK4-211ENST00000522556 MS4A18Q3C1V0 323 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 SWT1Q5T5J6 900 aaKnown RBP15.72■□□□□ 0.11
CLK4-211ENST00000522556 PAMR1Q6UXH9 720 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 LRRC17Q8N6Y2 441 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 PFN4Q8NHR9 129 aa15.72■□□□□ 0.11
CLK4-211ENST00000522556 TMEM255BQ8WV15 326 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms