RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 RPL4P36578 427 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SESN3P58005 492 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 GABPB1Q06547 395 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 MERTKQ12866 999 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 CBFBQ13951 182 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TRMT5Q32P41 509 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ESCO2Q56NI9 601 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 EXOSC6Q5RKV6 272 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 C6orf89Q6UWU4 347 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 GOLGA7Q7Z5G4 137 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ISCA2Q86U28 154 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 CCDC170Q8IYT3 715 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 KLHL36Q8N4N3 616 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 CDRT4Q8N9R6 151 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 OR9K2Q8NGE7 335 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SNX33Q8WV41 574 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 RAB40AQ8WXH6 277 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 NEURL3Q96EH8 262 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 LINC00470Q9BZP3 86 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ALG9Q9H6U8 611 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 CNTD2Q9H8S5 307 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ACER3Q9NUN7 267 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 LRCH1Q9Y2L9 728 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SPIN1Q9Y657 262 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SLC22A23A1A5C7 686 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SUPT3HB4E1H0 165 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 H3BNH8 94 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 RPL36A-HNRNPH2H7BZ11 118 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ANGPTL7O43827 346 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SUPT3HO75486 399 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SKAP2O75563 359 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 URI1O94763 535 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TGDSO95455 350 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 CLPTM1O96005 669 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TPM1P09493 284 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ZNF250P15622 560 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 CPT2P23786 658 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 FKBP2P26885 142 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SERPINB4P48594 390 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 OR2B6P58173 313 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 ARF1P84077 181 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 GTF2H2Q13888 395 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 FRG1Q14331 258 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 HEPACAMQ14CZ8 416 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 MSS51Q4VC12 460 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 RNASEH2BQ5TBB1 312 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 GKAP1Q5VSY0 366 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 GTF2H2CQ6P1K8 395 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 LRRC28Q86X40 367 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 NDUFA11Q86Y39 141 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 KLHDC1Q8N7A1 406 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SPC24Q8NBT2 197 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 MS4A3Q96HJ5 214 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TSPAN32Q96QS1 320 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 NAA11Q9BSU3 229 aaPredicted RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SF3B5Q9BWJ5 86 aaKnown RBP6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 DPAGT1Q9H3H5 408 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 RHOJQ9H4E5 214 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 GLIPR2Q9H4G4 154 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 SLCO1C1Q9NYB5 712 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TAS2R7Q9NYW3 318 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TMEM181Q9P2C4 612 aa6.31□□□□□ -1.4
HMBOX1-208ENST00000521516 TANC2Q9HCD6 1990 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 A0A096LPK6 155 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 NPIPB9F8W1W9 429 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 OR7A17O14581 309 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 TM9SF1O15321 606 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 TPD52L2O43399 206 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 UPK3AO75631 287 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SBK2P0C263 348 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 PRPS2P11908 318 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 UQCRC2P22695 453 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 IVDP26440 423 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SLC35A1P78382 337 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 IFT88Q13099 833 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 DUSP5Q16690 384 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 STEAP4Q687X5 459 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ZNF774Q6NX45 483 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ZG16BQ96DA0 208 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 GIMAP5Q96F15 307 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 AMDHD1Q96NU7 426 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 CDK15Q96Q40 435 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 CCDC106Q9BWC9 280 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 HOXD1Q9GZZ0 328 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 BRF2Q9HAW0 419 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 EQTNQ9NQ60 294 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 CHRNA9Q9UGM1 479 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 VPREB3Q9UKI3 123 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SIGLEC9Q9Y336 463 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 GTPBP1O00178 669 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 BANF1O75531 89 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 DUS4LO95620 317 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 KRT14P02533 472 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 APOBEC1P41238 236 aaKnown RBP6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 ETV4P43268 484 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SELENOPP49908 381 aa6.3□□□□□ -1.4
HMBOX1-208ENST00000521516 SLC12A2P55011 1212 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms