RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TIMM23BQ5SRD1 257 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ATG16L1Q676U5 607 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ABLIM2Q6H8Q1 611 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 SSX8Q7RTT4 187 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 GRINAQ7Z429 371 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 P2RY8Q86VZ1 359 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ADGRG3Q86Y34 549 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ZNF433Q8N7K0 673 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 KBTBD8Q8NFY9 601 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ARL5BQ96KC2 179 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 TEX37Q96LM6 180 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 CCDC115Q96NT0 180 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 NUF2Q9BZD4 464 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 TRIM2Q9C040 744 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 MANSC1Q9H8J5 431 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 MEAF6Q9HAF1 191 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 EXOSC3Q9NQT5 275 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 CTPS2Q9NRF8 586 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 MBNL3Q9NUK0 354 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 PNPOQ9NVS9 261 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 NPAP1Q9NZP6 1156 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 CHRNA9Q9UGM1 479 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 BTNL2Q9UIR0 455 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 LIPT1Q9Y234 373 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 HDGFL3Q9Y3E1 203 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 MAGED1Q9Y5V3 778 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 ATP23Q9Y6H3 246 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 CADP27708 2225 aa8.17□□□□□ -1.1
CTNNA1-221ENST00000520339 NSD1Q96L73 2696 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 GOLGA8QA0A0J9YX86 632 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 GOLGA8OA6NCC3 632 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 OR5H1A6NKK0 313 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 ZNF716A6NP11 495 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 SHISA9B4DS77 424 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 E9PBE3 544 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 GOLGA8NF8WBI6 632 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 HMGN4O00479 90 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 KLF11O14901 512 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 DNPH1O43598 174 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 RAMP1O60894 148 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 PMS2P2O95744 297 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 ALDOCP09972 364 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 GGT1P19440 569 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 FKBP2P26885 142 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 IL12AP29459 219 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 S100A3P33764 101 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 RYKP34925 604 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 IDUAP35475 653 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 CHI3L1P36222 383 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 KHKP50053 298 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 SLC16A1P53985 500 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 CLNS1AP54105 237 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 UFM1P61960 85 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 FAPQ12884 760 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 TMED1Q13445 227 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 PPA1Q15181 289 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 STK11Q15831 433 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 ETFDHQ16134 617 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 CLEC12BQ2HXU8 276 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 FAM174BQ3ZCQ3 159 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 FBXW9Q5XUX1 488 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 OGFOD2Q6N063 350 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 SPATA21Q7Z572 469 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 HMGN2P46Q86SG4 172 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 DTX2Q86UW9 622 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 RNF130Q86XS8 419 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 ZNF100Q8IYN0 542 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 KIRREL3Q8IZU9 778 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 ANKFN1Q8N957 763 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 ZNF563Q8TA94 476 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 CNOT9Q92600 299 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 MUCL1Q96DR8 90 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 TRMT61AQ96FX7 289 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 TRNT1Q96Q11 434 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 SLC35A5Q9BS91 424 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 INPP5KQ9BT40 448 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 TRAF4Q9BUZ4 470 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 OR11A1Q9GZK7 315 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 SLC38A1Q9H2H9 487 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 CISD1Q9NZ45 108 aaKnown RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 EMC3Q9P0I2 261 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 MARCOQ9UEW3 520 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 TRAPPC4Q9Y296 219 aa8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 SPIN1Q9Y657 262 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-221ENST00000520339 A0A1W2PP18 115 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 CCDC154A6NI56 674 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 AGAP5A6NIR3 686 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 EBAG9O00559 213 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 SDHDO14521 159 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 AP3D1O14617 1153 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 GPR171O14626 319 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 EDF1O60869 148 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 IGHV3-9P01782 118 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 IGHV4-39P01824 125 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 RNASE1P07998 156 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 CHRM4P08173 479 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 TROVE2P10155 538 aaKnown RBP eCLIP8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 CDKN1AP38936 164 aa8.15□□□□□ -1.1
CTNNA1-221ENST00000520339 CDKN2CP42773 168 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms