RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 SDC1P18827 310 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TCN1P20061 433 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 ELK4P28324 431 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 CPOXP36551 454 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 EIF1P41567 113 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 SLC6A8P48029 635 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 HOXA1P49639 335 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 PRRX1P54821 245 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 NR1H2P55055 460 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 RAC3P60763 192 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 STX3Q13277 289 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 KPNB1Q14974 876 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 POU4F3Q15319 338 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 IMPG1Q17R60 797 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 PLPPR5Q32ZL2 321 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 UGT3A2Q3SY77 523 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 FAM153CQ494X1 144 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 RFTN2Q52LD8 501 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 KLHL26Q53HC5 615 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 SLC25A53Q5H9E4 307 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 BEX5Q5H9J7 111 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TEX30Q5JUR7 227 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 Q5PR19 223 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 RAET1LQ5VY80 246 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 LIPMQ5VYY2 423 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 MFSD12Q6NUT3 480 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 ZNF551Q7Z340 670 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 UBQLNLQ8IYU4 475 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 CIARTQ8N365 385 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 ZNF611Q8N823 705 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 CNEP1R1Q8N9A8 125 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 SLC16A11Q8NCK7 471 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 ZFP28Q8NHY6 868 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TCP10LQ8TDR4 215 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 GIPC3Q8TF64 312 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 GTF3AQ92664 365 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 AKAP1Q92667 903 aaKnown RBP eCLIP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 HPS1Q92902 700 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 PHF21AQ96BD5 680 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 NMD3Q96D46 503 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 ZBED6CLQ96FA7 236 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 PIK3IP1Q96FE7 263 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 STACQ99469 402 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 MED18Q9BUE0 208 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 HDHD5Q9BXW7 423 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TBL1XR1Q9BZK7 514 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 PIGUQ9H490 435 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TUBB1Q9H4B7 451 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TREM1Q9NP99 234 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 UBQLN4Q9NRR5 601 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 DUSP22Q9NRW4 184 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 PROCRQ9UNN8 238 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 EMC9Q9Y3B6 208 aa5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 POLR3HQ9Y535 204 aaPredicted RBP5.05□□□□□ -1.6
CTNNA1-219ENST00000520158 TRAV20A0A0B4J274 112 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 A0A0J9YW62 118 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 A0A1W2PPH5 198 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 A0A1W2PPL8 197 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 A0A1W2PRB8 838 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 FAM172BPA6NC97 362 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 HMX3A6NHT5 357 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 F8W036 122 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 NPIPB9F8W1W9 429 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 H3BML4 177 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 AZIN1O14977 448 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 TM9SF1O15321 606 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 EFNA2O43921 213 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 TRIM13O60858 407 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 GCM2O75603 506 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 NTN1O95631 604 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 GUSBP08236 651 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 ACP2P11117 423 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 BMP2P12643 396 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 TALDO1P37837 337 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 PTH2RP49190 550 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 CCT3P49368 545 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 PRIM2P49643 509 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 ERFP50548 548 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 P2RY4P51582 365 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 MANFP55145 182 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 GLO1Q04760 184 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 RNPS1Q15287 305 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 SGCBQ16585 318 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 DUSP5Q16690 384 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 KCTD21Q4G0X4 260 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 TIGD2Q4W5G0 525 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 ZNF385BQ569K4 471 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 PDSS1Q5T2R2 415 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 ATAD3BQ5T9A4 648 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 C3orf33Q6P1S2 294 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 SSX8Q7RTT4 187 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 FAM122BQ7Z309 247 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 PIWIL3Q7Z3Z3 882 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 NET1Q7Z628 596 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 ADGRG5Q8IZF4 528 aa5.04□□□□□ -1.6
CTNNA1-219ENST00000520158 GABRG1Q8N1C3 465 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms