RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SYPL1Q16563 259 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 TMEM52BQ4KMG9 183 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 LINC01620Q4KN68 170 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ACSM5Q6NUN0 579 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ERASQ7Z444 233 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 VRK2Q86Y07 508 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 C7orf33Q8WU49 177 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 MRPL38Q96DV4 380 aaKnown RBP2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ARHGDIGQ99819 225 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 SLC25A39Q9BZJ4 359 aaPredicted RBP2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ZNF385DQ9H6B1 395 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 AIPL1Q9NZN9 384 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 WRAP73Q9P2S5 460 aaPredicted RBP2.36□□□□□ -2.03
LINC01088-211ENST00000515597 RAB26Q9ULW5 256 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 B9D1Q9UPM9 204 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 NEU3Q9UQ49 428 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 SCML2Q9UQR0 700 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 CDH10Q9Y6N8 788 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 GCN1Q92616 2671 aaKnown RBP2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ZFYVE26Q68DK2 2539 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 AK9Q5TCS8 1911 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ZZEF1O43149 2961 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 CACNA1HO95180 2353 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ANKRD36CQ5JPF3 1778 aa2.36□□□□□ -2.03
LINC01088-211ENST00000515597 ANKRD11Q6UB99 2663 aaPredicted RBP2.35□□□□□ -2.03
LINC01088-211ENST00000515597 BRWD1Q9NSI6 2320 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 PPIAL4CA0A0B4J2A2 164 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 A0A1B0GWB2 263 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 USP27XA6NNY8 438 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 ZNF705EA8MWA4 302 aaPredicted RBP2.35□□□□□ -2.03
LINC01088-211ENST00000515597 E7ESA3 106 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 F8WDY8 70 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 K7N7A8 449 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 SULT2B1O00204 365 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 HCN1O60741 890 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 ECI2O75521 394 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 OR4F21O95013 312 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 AKR7A3O95154 331 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 SNAPINO95295 136 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 PTBP3O95758 552 aaKnown RBP2.35□□□□□ -2.03
LINC01088-211ENST00000515597 CSF2P04141 144 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 PPIAL4GP0DN37 164 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 RPS2P15880 293 aaKnown RBP2.35□□□□□ -2.03
LINC01088-211ENST00000515597 AQP1P29972 269 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 NBL1P41271 181 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 CAMLGP49069 296 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 NUP107P57740 925 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 RAB40BQ12829 278 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 SCGB2A2Q13296 93 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 ARFRP1Q13795 201 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 CDC37Q16543 378 aaPredicted RBP2.35□□□□□ -2.03
LINC01088-211ENST00000515597 PARP10Q53GL7 1025 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 TFDP3Q5H9I0 405 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 AGBL2Q5U5Z8 902 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 ATF7IP2Q5U623 682 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 UNQ9370/PRO34162Q6UXP9 181 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 IL34Q6ZMJ4 242 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 ARMCX2Q7L311 632 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 C16orf62Q7Z3J2 963 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 NANPQ8TBE9 248 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 TCTEX1D2Q8WW35 142 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 CELF6Q96J87 481 aaKnown RBP2.35□□□□□ -2.03
LINC01088-211ENST00000515597 NRTNQ99748 197 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 WDR76Q9H967 626 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 MAD1L1Q9Y6D9 718 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 NAV2Q8IVL1 2488 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 FRYQ5TBA9 3013 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 FRMPD3Q5JV73 1810 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 SPTBN2O15020 2390 aa2.35□□□□□ -2.03
LINC01088-211ENST00000515597 MYO10Q9HD67 2058 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 A0A1B0GUA9 196 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 GSAPA4D1B5 854 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 SDHDO14521 159 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 SLITRK3O94933 977 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 CALCBP10092 127 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 CCNE1P24864 410 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 HTR1EP28566 365 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 IL1RL1Q01638 556 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 CCDC173Q0VFZ6 552 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 EBI3Q14213 229 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 C12orf60Q5U649 245 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 UNC5DQ6UXZ4 953 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 DPY19L4Q7Z388 723 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 ZNF433Q8N7K0 673 aaPredicted RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 OR52I1Q8NGK6 324 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 PNPT1Q8TCS8 783 aaKnown RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 GPA33Q99795 319 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 THUMPD2Q9BTF0 503 aaKnown RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 RNF126Q9BV68 326 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 POLR2J2Q9GZM3 115 aaKnown RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 NAT10Q9H0A0 1025 aaKnown RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 MAGT1Q9H0U3 335 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 POLR2J3Q9H1A7 115 aaKnown RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 RHOJQ9H4E5 214 aa2.34□□□□□ -2.03
LINC01088-211ENST00000515597 ZNF331Q9NQX6 463 aaPredicted RBP2.34□□□□□ -2.03
LINC01088-211ENST00000515597 MAP3K15Q6ZN16 1313 aa2.34□□□□□ -2.04
LINC01088-211ENST00000515597 IBTKQ9P2D0 1353 aaPredicted RBP2.34□□□□□ -2.04
LINC01088-211ENST00000515597 DDX60Q8IY21 1712 aaKnown RBP2.34□□□□□ -2.04
LINC01088-211ENST00000515597 A0A087WZY1 265 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 A0A1B0GUL7 405 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms