RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TMEM27Q9HBJ8 222 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 PARPBPQ9NWS1 579 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 ABCD2Q9UBJ2 740 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 ST6GALNAC2Q9UJ37 374 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 RASD1Q9Y272 281 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 SLC9A8Q9Y2E8 581 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 AP3M1Q9Y2T2 418 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 NOSIPQ9Y314 301 aaKnown RBP8.57□□□□□ -1.04
RNF4-221ENST00000513643 PLCE1Q9P212 2302 aa8.57□□□□□ -1.04
RNF4-221ENST00000513643 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ELOA3DA6NLF2 546 aaPredicted RBP8.56□□□□□ -1.04
RNF4-221ENST00000513643 CCT8L1PA6NM43 557 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 MS4A18H0YCH9 400 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 NME4O00746 187 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 CHP2O43745 196 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 MRPL33O75394 65 aaKnown RBP8.56□□□□□ -1.04
RNF4-221ENST00000513643 ATE1O95260 518 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 IGF2P01344 180 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 BGLAPP02818 100 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ITGA5P08648 1049 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 IST1P53990 364 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 FOXG1P55316 489 aaPredicted RBP8.56□□□□□ -1.04
RNF4-221ENST00000513643 TSC22D1Q15714 1073 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 TAB1Q15750 504 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 MS4A18Q3C1V0 323 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ELOA3BQ3SY89 546 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 BEX5Q5H9J7 111 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ENTPD8Q5MY95 495 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 C1QTNF12Q5T7M4 302 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ADAM5Q6NVV9 412 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 PAMR1Q6UXH9 720 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ARPINQ7Z6K5 226 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 P2RY8Q86VZ1 359 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 MICU2Q8IYU8 434 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ANKS4BQ8N8V4 417 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ELOA3Q8NG57 546 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 APH1AQ96BI3 265 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 MCHR1Q99705 422 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 FOXC2Q99958 501 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 TAPBPLQ9BX59 468 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 EFCAB1Q9HAE3 211 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 SLC7A10Q9NS82 523 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 C6orf203Q9P0P8 240 aaPredicted RBP8.56□□□□□ -1.04
RNF4-221ENST00000513643 GMPR2Q9P2T1 348 aaKnown RBP8.56□□□□□ -1.04
RNF4-221ENST00000513643 SEC14L4Q9UDX3 406 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 B3GALT5Q9Y2C3 310 aa8.56□□□□□ -1.04
RNF4-221ENST00000513643 ZFHX3Q15911 3703 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 ARID1AO14497 2285 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 ELOVL7A1L3X0 281 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 ENO4A6NNW6 628 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 AIM2O14862 343 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 AHSA1O95433 338 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 TSPAN19P0C672 248 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 CD53P19397 219 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 SELENOWP63302 87 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 LIPEQ05469 1076 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 MFSD13AQ14CX5 517 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 GABRA6Q16445 453 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 TIMM23BQ5SRD1 257 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 TSPO2Q5TGU0 170 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 H1FNTQ75WM6 255 aaPredicted RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 BHLHA15Q7RTS1 189 aaPredicted RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 SSX8Q7RTT4 187 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 RANBP3LQ86VV4 465 aaPredicted RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 ZNF100Q8IYN0 542 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 SCAIQ8N9R8 606 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 OR2T12Q8NG77 320 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 LILRB1Q8NHL6 650 aaPredicted RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 ADAMTS16Q8TE57 1224 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 KISS1RQ969F8 398 aaPredicted RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 CMTM5Q96DZ9 223 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 MPP4Q96JB8 637 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 OXGR1Q96P68 337 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 LINC00470Q9BZP3 86 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 SLC19A3Q9BZV2 496 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 POLR2J2Q9GZM3 115 aaKnown RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 POLR2J3Q9H1A7 115 aaKnown RBP8.55□□□□□ -1.04
RNF4-221ENST00000513643 ADPRHL2Q9NX46 363 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 RPS6KB2Q9UBS0 482 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 BAG5Q9UL15 447 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 CORINQ9Y5Q5 1042 aa8.55□□□□□ -1.04
RNF4-221ENST00000513643 TRAPPC13A5PLN9 417 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 OR5H1A6NKK0 313 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 RPL36A-HNRNPH2H7BZ11 118 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 M0R082 166 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 TRAF3IP2O43734 574 aaPredicted RBP8.54□□□□□ -1.04
RNF4-221ENST00000513643 LYZL6O75951 148 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 HPRP00739 348 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 MT-ATP6P00846 226 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 IFNA14P01570 189 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 THRBP10828 461 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 GRPRP30550 384 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 GSK3BP49841 420 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 SLC7A2P52569 658 aa8.54□□□□□ -1.04
RNF4-221ENST00000513643 NR1H2P55055 460 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms