RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 OR4F21O95013 312 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 MT-ATP6P00846 226 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ETS1P14921 441 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF30P17039 623 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ASMTP46597 345 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 DAP3P51398 398 aaKnown RBP0.87□□□□□ -2.27
PDGFC-208ENST00000512711 HSD17B7P56937 341 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 STARD6P59095 220 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 FZD2Q14332 565 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 MXD4Q14582 209 aaPredicted RBP0.87□□□□□ -2.27
PDGFC-208ENST00000512711 PDK1Q15118 436 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 C2orf76Q3KRA6 126 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 CCDC184Q52MB2 194 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF311Q5JNZ3 666 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 FAM92BQ6ZTR7 304 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 KIAA1328Q86T90 577 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 SPC24Q8NBT2 197 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 DENND6BQ8NEG7 585 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 OR52B4Q8NGK2 314 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ACTRT1Q8TDG2 376 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 EXOSC8Q96B26 276 aaKnown RBP0.87□□□□□ -2.27
PDGFC-208ENST00000512711 AKR1E2Q96JD6 320 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 OR2A5Q96R48 311 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 RUFY1Q96T51 708 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ATP6V0BQ99437 205 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ALG12Q9BV10 488 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 CAPS2Q9BXY5 557 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 POLR1EQ9GZS1 481 aaKnown RBP0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ATXN10Q9UBB4 475 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 B9D1Q9UPM9 204 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 ALG6Q9Y672 507 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 NFASCO94856 1347 aa0.87□□□□□ -2.27
PDGFC-208ENST00000512711 WDR62O43379 1518 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 IGLV1-50A0A075B6I6 118 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 IGLV3-12A0A075B6K2 115 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 GSAPA4D1B5 854 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 PRSS37A4D1T9 235 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 RRP8O43159 456 aaKnown RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 CXCL13O43927 109 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 CBR3O75828 277 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 OPN1MWP04001 364 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 OPN1MW2P0DN77 364 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 OPN1MW3P0DN78 364 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 ABOP16442 354 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 PGCP20142 388 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 PCMT1P22061 227 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 ANXA13P27216 316 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 CALCRP30988 508 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 ADRA1AP35348 466 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 FGF8P55075 233 aaPredicted RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 SYCNQ0VAF6 134 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 SMARCB1Q12824 385 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 SLC39A6Q13433 755 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 CEBPEQ15744 281 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 IGFBP7Q16270 282 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 SGCAQ16586 387 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 Q6ZN92 141 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 NCCRP1Q6ZVX7 275 aaPredicted RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 CENPUQ71F23 418 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 GET4Q7L5D6 327 aaPredicted RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 DPY19L4Q7Z388 723 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 MYLPFQ96A32 169 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 PINX1Q96BK5 328 aaKnown RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 ITCHQ96J02 903 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 CCDC43Q96MW1 224 aaKnown RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 VPS35Q96QK1 796 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 MRPL45Q9BRJ2 306 aaKnown RBP0.86□□□□□ -2.27
PDGFC-208ENST00000512711 SLC35A5Q9BS91 424 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 ACAT2Q9BWD1 397 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 GSDMCQ9BYG8 508 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 ACTR6Q9GZN1 396 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 C12orf10Q9HB07 376 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 OR12D3Q9UGF7 316 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 GSTK1Q9Y2Q3 226 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 UBIAD1Q9Y5Z9 338 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 SORL1Q92673 2214 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 TENM1Q9UKZ4 2725 aa0.86□□□□□ -2.27
PDGFC-208ENST00000512711 IGHV5-51A0A0C4DH38 117 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 C12orf77C9JDV5 145 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 SLC31A2O15432 143 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 ZNF207O43670 478 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 PTBP3O95758 552 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 TGFAP01135 160 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 LGALS2P05162 132 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 KLK3P07288 261 aaPredicted RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 P0C880 135 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 PRPS2P11908 318 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 PSMC3P17980 439 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 TCN2P20062 427 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 TBXA2RP21731 343 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 RFC4P35249 363 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 HPCAL1P37235 193 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 GSSP48637 474 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 PDIA2Q13087 525 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 SRSF5Q13243 272 aaKnown RBP0.85□□□□□ -2.27
PDGFC-208ENST00000512711 RIPK1Q13546 671 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 GAMTQ14353 236 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 PARP15Q460N3 678 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 GGTA1PQ4G0N0 100 aa0.85□□□□□ -2.27
PDGFC-208ENST00000512711 TP53I3Q53FA7 332 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms