RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MSTNO14793 375 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SH2D1BO14796 132 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 CDC14BO60729 498 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 LYPLA2O95372 231 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ETS2P15036 469 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 RAB3BP20337 219 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 C21orf33P30042 268 aaPredicted RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 LGALS7P47929 136 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZNF91Q05481 1191 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 GK3PQ14409 553 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OXA1LQ15070 435 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZC3H3Q8IXZ2 948 aaKnown RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 MYADMQ96S97 322 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 RASL11BQ9BPW5 248 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OR11A1Q9GZK7 315 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 TCEAL2Q9H3H9 227 aaPredicted RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 HS3ST1O14792 307 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 GPR37O15354 613 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SLC16A7O60669 478 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 COX7A1P24310 79 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 CD70P32970 193 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SLC6A11P48066 632 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 TAS2R60P59551 318 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 DUSP7Q16829 419 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ADPRMQ3LIE5 342 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 FAM78AQ5JUQ0 283 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 WBP2NLQ6ICG8 309 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SLC36A1Q7Z2H8 476 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ACBD4Q8NC06 268 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OR8B3Q8NGG8 313 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 MIB2Q96AX9 1013 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 PYURFQ96I23 114 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 FOXN4Q96NZ1 517 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OR8B2Q96RD0 313 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OSGIN2Q9Y236 505 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ATG4BQ9Y4P1 393 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 HCFC2Q9Y5Z7 792 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 POMT1Q9Y6A1 747 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZNF840PA6NDX5 716 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 SMPD2O60906 423 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 OR5H8P0DN80 308 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 EGR1P18146 543 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 MC2RQ01718 297 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 C17orf67Q0P5P2 114 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 GGTLC2Q14390 218 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZNF141Q15928 474 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZNF766Q5HY98 468 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 LAIR1Q6GTX8 287 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 TMEM139Q8IV31 216 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 APCDD1Q8J025 514 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 MFSD4AQ8N468 514 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 LMNTD1Q8N9Z9 388 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 DUSP19Q8WTR2 217 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 FAM84AQ96KN4 292 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 DHX33Q9H6R0 707 aaKnown RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 UBQLN4Q9NRR5 601 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 EXTL2Q9UBQ6 330 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZNF443Q9Y2A4 671 aaPredicted RBP8.31□□□□□ -1.08
VCAN-208ENST00000512590 ZNF835Q9Y2P0 537 aa8.31□□□□□ -1.08
VCAN-208ENST00000512590 TET3O43151 1660 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 HELTA6NFD8 242 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 SEMA7AO75326 666 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 STSP08842 583 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 RAB9AP51151 201 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 SGSHP51688 502 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 TPBGQ13641 420 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 EARS2Q5JPH6 523 aaKnown RBP8.3□□□□□ -1.08
VCAN-208ENST00000512590 EGFLAMQ63HQ2 1017 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 NADSYN1Q6IA69 706 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 CDC20BQ86Y33 519 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 THNSL2Q86YJ6 484 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ZNF595Q8IYB9 648 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 C11orf42Q8N5U0 333 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 APOBEC4Q8WW27 367 aaKnown RBP8.3□□□□□ -1.08
VCAN-208ENST00000512590 SDCBP2Q9H190 292 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 DHCR7Q9UBM7 475 aaKnown RBP8.3□□□□□ -1.08
VCAN-208ENST00000512590 MBD1Q9UIS9 605 aaPredicted RBP8.3□□□□□ -1.08
VCAN-208ENST00000512590 OAZ3Q9UMX2 235 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 A1L4Q6 167 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 DOK2O60496 412 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 TRAPPC2P0DI81 140 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 TRAPPC2BP0DI82 140 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 OR10A3P58181 314 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 NDUFAF5Q5TEU4 345 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 LCN10Q6JVE6 187 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 SSX7Q7RTT5 188 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 OR4C12Q96R67 309 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 AAMDCQ9H7C9 122 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 SRFP11831 508 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 PRKACAP17612 351 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 UBE2MP61081 183 aaKnown RBP8.3□□□□□ -1.08
VCAN-208ENST00000512590 EIF3IQ13347 325 aaKnown RBP8.3□□□□□ -1.08
VCAN-208ENST00000512590 ANKRD34AQ69YU3 496 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 SSX9Q7RTT3 188 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ZNF679Q8IYX0 411 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
VCAN-208ENST00000512590 ARV1Q9H2C2 271 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms