RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GPR27Q9NS67 375 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 ING4Q9UNL4 249 aa16.4■□□□□ 0.22
CCHCR1-228ENST00000509552 TEX13CA0A0J9YWL9 993 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 GIFP27352 417 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 CCINQ13939 588 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 SERTAD2Q14140 314 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 ANGPT1Q15389 498 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM205BPQ63HN1 556 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 MOSPD2Q8NHP6 518 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 HSD17B8Q92506 261 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 ALG12Q9BV10 488 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 RXFP3Q9NSD7 469 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF281Q9Y2X9 895 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 HSPB11Q9Y547 144 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 IMPA2O14732 288 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 CTDSPLO15194 276 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 GSTZ1O43708 216 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 IGLV3-19P01714 112 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 CCR4P51679 360 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC22A10Q63ZE4 541 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 CREB3L2Q70SY1 520 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC35F3Q8IY50 421 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 METTL27Q8N6F8 245 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 GATSQ8NAP1 163 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 OR51Q1Q8NH59 317 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 LGALS14Q8TCE9 139 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 NECTIN4Q96NY8 510 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 GHITMQ9H3K2 345 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 UBQLN4Q9NRR5 601 aa16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 MRPL39Q9NYK5 338 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-228ENST00000509552 IGKV1D-42A0A075B6H8 117 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 A0A1B0GVT2 93 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 IGF2P01344 180 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 PROS1P07225 676 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 TACSTD2P09758 323 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 GALNSP34059 522 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 CAPZBP47756 277 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 GALK2Q01415 458 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC6A19Q695T7 634 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 ESPNLQ6ZVH7 1005 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 MED25Q71SY5 747 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 Q96M85 177 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 OR2M2Q96R28 347 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 YIPF2Q9BWQ6 316 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 NANSQ9NR45 359 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 PLCL2Q9UPR0 1127 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC6A5Q9Y345 797 aa16.38■□□□□ 0.21
CCHCR1-228ENST00000509552 A0A1W2PPC4 97 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 AKR7A2O43488 359 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 UBL4AP11441 157 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 AQP2P41181 271 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SNRPD2P62316 118 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 BIKQ13323 160 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SNTB2Q13425 540 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM220AQ7Z4H9 259 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 OR7G1Q8NGA0 311 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 PHOSPHO1Q8TCT1 267 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 OR51J1Q9H342 316 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 EMC7Q9NPA0 242 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 C2orf42Q9NWW7 574 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SOHLH2Q9NX45 425 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF222Q9UK12 451 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 MOKQ9UQ07 419 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 HIF3AQ9Y2N7 669 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 PCDHGA9Q9Y5G4 932 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 TRABD2BA6NFA1 517 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM171A2A8MVW0 826 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 C17orf105B2RV13 164 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SCDO00767 359 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 FABP7O15540 132 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 CD14P08571 375 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 GRPRP30550 384 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 NUDT1P36639 197 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 ADH7P40394 386 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 HTR2BP41595 481 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 CDKN2AP42771 156 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC25A1P53007 311 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 GNG2P59768 71 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 DYRK1AQ13627 763 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF74Q16587 644 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 CD276Q5ZPR3 534 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 ZNF767PQ75MW2 155 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 KCTD20Q7Z5Y7 419 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 ATG4DQ86TL0 474 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 FAM71CQ8NEG0 241 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SMIM4Q8WVI0 70 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 OIT3Q8WWZ8 545 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 DERL3Q96Q80 235 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 SLC38A3Q99624 504 aa16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 AKAP7Q9P0M2 348 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 TDRD6O60522 2096 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-228ENST00000509552 PSMD9O00233 223 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 TMEM127O75204 238 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ITGA10O75578 1167 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 APEHP13798 732 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 PRKCAP17252 672 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 RAG2P55895 527 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 ALG10Q5BKT4 473 aa16.36■□□□□ 0.21
CCHCR1-228ENST00000509552 LINC01590Q5TEZ4 76 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms