RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GPR119Q8TDV5 335 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 TMEM185BQ9H7F4 350 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 COPS3Q9UNS2 423 aa13.52□□□□□ -0.24
PHF3-209ENST00000509330 TNRC6BQ9UPQ9 1833 aaKnown RBP13.52□□□□□ -0.25
PHF3-209ENST00000509330 IGLV3-12A0A075B6K2 115 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 TMEM221A6NGB7 291 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 M0R296 226 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 SUSD5O60279 629 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 CPNE3O75131 537 aaKnown RBP13.52□□□□□ -0.25
PHF3-209ENST00000509330 PPP5CP53041 499 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 GALEQ14376 348 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 PON3Q15166 354 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 BTBD16Q32M84 506 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 OR52N1Q8NH53 320 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 RHBDD1Q8TEB9 315 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 SLC35B4Q969S0 331 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 ABCB9Q9NP78 766 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 EXOSC3Q9NQT5 275 aaKnown RBP13.52□□□□□ -0.25
PHF3-209ENST00000509330 GNG8Q9UK08 70 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.25
PHF3-209ENST00000509330 PEX16Q9Y5Y5 336 aa13.52□□□□□ -0.25
PHF3-209ENST00000509330 NUP210LQ5VU65 1888 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 TMEM200CA6NKL6 621 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 RNF13O43567 381 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 FADS1O60427 444 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 HIST1H2ABP04908 130 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 PGCP20142 388 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 CALRP27797 417 aaKnown RBP13.51□□□□□ -0.25
PHF3-209ENST00000509330 CENPAP49450 140 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 CBFBQ13951 182 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 STEAP3Q658P3 488 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 HIST3H2AQ7L7L0 130 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 OR10G3Q8NGC4 313 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 HIST1H2ACQ93077 130 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 NXF2Q9GZY0 626 aaKnown RBP13.51□□□□□ -0.25
PHF3-209ENST00000509330 PPIL3Q9H2H8 161 aaKnown RBP13.51□□□□□ -0.25
PHF3-209ENST00000509330 EVA1AQ9H8M9 152 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 TAS2R10Q9NYW0 307 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 ZNF229Q9UJW7 825 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 BAIAP2Q9UQB8 552 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 PTRH2Q9Y3E5 179 aaKnown RBP13.51□□□□□ -0.25
PHF3-209ENST00000509330 KNTC1P50748 2209 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 A0A087WV48 116 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 TMEM72A0PK05 275 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 LOC110117498-PIK3R3F6TDL0 507 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 H3BML4 177 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 TO15178 435 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 MPLP40238 635 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 RPS4XP62701 263 aaKnown RBP13.51□□□□□ -0.25
PHF3-209ENST00000509330 PRAMEF20Q5VT98 475 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 SLC25A46Q96AG3 418 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 COX4I2Q96KJ9 171 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 CNN2Q99439 309 aaKnown RBP13.51□□□□□ -0.25
PHF3-209ENST00000509330 TRIM36Q9NQ86 728 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 GRHPRQ9UBQ7 328 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 GSTK1Q9Y2Q3 226 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 R4GN57 208 aa13.51□□□□□ -0.25
PHF3-209ENST00000509330 TMED7-TICAM2A0A0A6YYA0 188 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ARHGEF9O43307 516 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 MT-ND5P03915 603 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 P2RX1P51575 399 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 PRPS1P60891 318 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 FOXK1P85037 733 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 CARTPTQ16568 116 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SLC6A19Q695T7 634 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 TMEM91Q6ZNR0 172 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 GDPGP1Q6ZNW5 385 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SYT9Q86SS6 491 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 OR8H2Q8N162 312 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 AGBL5Q8NDL9 886 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SNX33Q8WV41 574 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ORAI1Q96D31 301 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 TSPAN32Q96QS1 320 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ADAM19Q9H013 955 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SYT4Q9H2B2 425 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ACOXLQ9NUZ1 547 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SLC6A5Q9Y345 797 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 TMED7Q9Y3B3 224 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 EP300Q09472 2414 aaPredicted RBP13.5□□□□□ -0.25
PHF3-209ENST00000509330 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ASAH2BP0C7U1 165 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ZNF12P17014 697 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 RPS18P62269 152 aaKnown RBP13.5□□□□□ -0.25
PHF3-209ENST00000509330 SQSTM1Q13501 440 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 MELKQ14680 651 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SLC35F2Q8IXU6 374 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 POC5Q8NA72 575 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 GALNT6Q8NCL4 622 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 PALMDQ9NP74 551 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 TIGARQ9NQ88 270 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 ENAMQ9NRM1 1142 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 PLEKHB1Q9UF11 243 aaPredicted RBP13.5□□□□□ -0.25
PHF3-209ENST00000509330 HIF3AQ9Y2N7 669 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
PHF3-209ENST00000509330 HLA-DPB1P04440 258 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 CD14P08571 375 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 MAGEB1P43366 347 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SLC6A8P48029 635 aa13.5□□□□□ -0.25
PHF3-209ENST00000509330 SLC26A5P58743 744 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms