RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 CLIP4Q8N3C7 705 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 MSI2Q96DH6 328 aaKnown RBP11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 BOD1Q96IK1 185 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 ZBTB18Q99592 522 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 TAPBPLQ9BX59 468 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 PIF1Q9H611 641 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 SLC6A13Q9NSD5 602 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 ADPRHL2Q9NX46 363 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 PRDM4Q9UKN5 801 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 RFXANKO14593 260 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 TCF21O43680 179 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 CSF3P09919 207 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 TFPTP0C1Z6 253 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 KITP10721 976 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 PRG2P13727 222 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 ETFAP13804 333 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 CFPP27918 469 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 CRATP43155 626 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 SELENOPP49908 381 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 PDLIM4P50479 330 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 P2RY4P51582 365 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 LGALS3BPQ08380 585 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 CARTPTQ16568 116 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 TBRG1Q3YBR2 411 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 LIN52Q52LA3 116 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 TNFAIP8L3Q5GJ75 292 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 HHATQ5VTY9 493 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 GLB1L3Q8NCI6 653 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 BCL2L2Q92843 193 aaPredicted RBP11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 SORCS2Q96PQ0 1159 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 SLC38A2Q96QD8 506 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 PARD6BQ9BYG5 372 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 CALML5Q9NZT1 146 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 P2RX2Q9UBL9 471 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 ZNF232Q9UNY5 417 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 DYSFO75923 2080 aa11.67□□□□□ -0.54
POLR2J3-212ENST00000507355 DSPPQ9NZW4 1301 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 TGP01266 2768 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 TRPC5OSA6NMA1 111 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 ZNF587BE7ETH6 402 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 NR5A2O00482 541 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 HDAC3O15379 428 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 KCNAB3O43448 404 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 SLC22A3O75751 556 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 VAMP5O95183 116 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 ANP32DO95626 131 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 LGI1O95970 557 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 TGFAP01135 160 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 IL6P05231 212 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 BCHEP06276 602 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 APEHP13798 732 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 ITGA2P17301 1181 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 NCF2P19878 526 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 CRISP3P54108 245 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 DSTNP60981 165 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 NIPAL3Q6P499 406 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 ANKRD16Q6P6B7 361 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 LINGO2Q7L985 606 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 MEX3DQ86XN8 651 aaKnown RBP11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 EPHX4Q8IUS5 362 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 KDM8Q8N371 416 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 SLC38A5Q8WUX1 472 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 VRK1Q99986 396 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 KCNS3Q9BQ31 491 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 PIMREGQ9BSJ6 248 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 PRR14Q9BWN1 585 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 TPT1P8Q9HAU6 139 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 OBP2BQ9NPH6 170 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 ZNF443Q9Y2A4 671 aaPredicted RBP11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 CHST2Q9Y4C5 530 aa11.66□□□□□ -0.54
POLR2J3-212ENST00000507355 A0A0G2JPF8 293 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 HNRNPCL2B2RXH8 293 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 HNRNPCL3B7ZW38 293 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 FRS3O43559 492 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 HNRNPCL1O60812 293 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 NPIPB7O75200 414 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 UPK3AO75631 287 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 CRYAAP02489 173 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 HNRNPCL4P0DMR1 293 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 SERPINF1P36955 418 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 NR4A2P43354 598 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 UBE2NP61088 152 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 TUBA1BP68363 451 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 TUBA4AP68366 448 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 LARS2Q15031 903 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 CR1LQ2VPA4 569 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 GTDC1Q4AE62 458 aa11.65□□□□□ -0.54
POLR2J3-212ENST00000507355 PDCD4Q53EL6 469 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms