RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RAMP1O60894 148 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 COX10Q12887 443 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 RAET1LQ5VY80 246 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 HBMQ6B0K9 141 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR2A2Q6IF42 318 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF620Q6ZNG0 422 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 RPRMLQ8N4K4 120 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR6K3Q8NGY3 331 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 STARD4Q96DR4 205 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF845Q96IR2 970 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ADAD1Q96M93 576 aaKnown RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 PITX2Q99697 317 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 STX18Q9P2W9 335 aaKnown RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 MGAT4BQ9UQ53 548 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR3A2P47893 321 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 TAS2R41P59536 307 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 CHRNB3Q05901 458 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 KRTAP27-1Q3LI81 207 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 C10orf128Q5T292 105 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 TMEM211Q6ICI0 200 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 TBPL2Q6SJ96 375 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 RPTNQ6XPR3 784 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF808Q8N4W9 903 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 RELL2Q8NC24 303 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 VANGL1Q8TAA9 524 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 MAGEE2Q8TD90 523 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 GNPDA2Q8TDQ7 276 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ITLN2Q8WWU7 325 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ASB10Q8WXI3 467 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 OXGR1Q96P68 337 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 PKP2Q99959 881 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 CRNNQ9UBG3 495 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF407Q9C0G0 2248 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 hCG_2039718K7EN88 272 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 AQP8O94778 261 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ALPLP05186 524 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 STARP49675 285 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 C1orf146Q5VVC0 180 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 GFRALQ6UXV0 394 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 H1FNTQ75WM6 255 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 CD163Q86VB7 1156 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 C20orf196Q8IYI0 205 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 C10orf67Q8IYJ2 551 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 PACRGLQ8N7B6 248 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 BPIFA2Q96DR5 249 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ALPK1Q96QP1 1244 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 MARCH7Q9H992 704 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 SMURF2Q9HAU4 748 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 CACYBPQ9HB71 228 aaKnown RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ELOA3DA6NLF2 546 aaPredicted RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 GADD45GO95257 159 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 CXCR1P25024 350 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 RFX3P48380 749 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 DAPP51397 102 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 COPZ1P61923 177 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 MRPL49Q13405 166 aaKnown RBP7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ELOA3BQ3SY89 546 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 TFAP2EQ6VUC0 442 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ELOA3Q8NG57 546 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR9K2Q8NGE7 335 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF563Q8TA94 476 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 SLC26A7Q8TE54 656 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 KCNK17Q96T54 332 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 STOML1Q9UBI4 398 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 MALT1Q9UDY8 824 aa7.36□□□□□ -1.23
CDC42SE2-208ENST00000505065 FAM221AA4D161 298 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 ENO4A6NNW6 628 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 IDH3BO43837 385 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 GASTP01350 101 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 UQCRFS1P47985 274 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 CARD18P57730 90 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 KCNMB1Q16558 191 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 PDSS1Q5T2R2 415 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 FAM205BPQ63HN1 556 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 C12orf73Q69YU5 71 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 RPL13AP3Q6NVV1 102 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 MTFR2Q6P444 385 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 KLHL17Q6TDP4 642 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 DEF8Q6ZN54 512 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR4K5Q8NGD3 323 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR6X1Q8NH79 312 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 OSTF1Q92882 214 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 ZNF75AQ96N20 296 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 RDH12Q96NR8 316 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 SEC14L4Q9UDX3 406 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 MED31Q9Y3C7 131 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 ICMTO60725 284 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 ENTPD5O75356 428 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 PGA4P0DJD7 388 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 PGA3P0DJD8 388 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 RPS3AP61247 264 aaKnown RBP7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 RBPJQ06330 500 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 FCRLAQ7L513 359 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 LIX1LQ8IVB5 337 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR8D4Q8NGM9 314 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 CCDC124Q96CT7 223 aaKnown RBP7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 SGTBQ96EQ0 304 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 OR2M2Q96R28 347 aa7.35□□□□□ -1.23
CDC42SE2-208ENST00000505065 FNDC11Q9BVV2 318 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms