RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NATD1Q8N6N6 113 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 SYT14Q8NB59 555 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 OR2T11Q8NH01 316 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 PKP2Q99959 881 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 SYT3Q9BQG1 590 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 LINC00470Q9BZP3 86 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ZNF350Q9GZX5 532 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 TNFRSF12AQ9NP84 129 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 EXOSC3Q9NQT5 275 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 EXD2Q9NVH0 621 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ATAD3AQ9NVI7 634 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 OSGIN1Q9UJX0 560 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 NOX1Q9Y5S8 564 aa13.56□□□□□ -0.24
PDLIM7-210ENST00000503827 ZC3H12DA2A288 527 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 CFLARO15519 480 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 UPK3AO75631 287 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 RP2O75695 350 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 FSHBP01225 129 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 BCKDHAP12694 445 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 GCH1P30793 250 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 RPS26P62854 115 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 ARF1P84077 181 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 MVKQ03426 396 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 OR7A5Q15622 319 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 MSMPQ1L6U9 139 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 CFAP157Q5JU67 520 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 LIPMQ5VYY2 423 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 CLEC6AQ6EIG7 209 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 TIFABQ6ZNK6 161 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 DVL3Q92997 716 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 GPA33Q99795 319 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 ZDHHC18Q9NUE0 388 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 ZDHHC2Q9UIJ5 367 aa13.55□□□□□ -0.24
PDLIM7-210ENST00000503827 LIPT2A6NK58 231 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 TMEM229AB2RXF0 380 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 TMEM114B3SHH9 223 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 SCN2BO60939 215 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 VAMP5O95183 116 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 TACR3P29371 465 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 SOAT1P35610 550 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 GLRXP35754 106 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 CAPZA2P47755 286 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 BAMBIQ13145 260 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 MAD2L1BPQ15013 274 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 MDP1Q86V88 176 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 RELL1Q8IUW5 271 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 CCDC36Q8IYA8 594 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 SLC25A28Q96A46 364 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 OPN4Q9UHM6 478 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 WDR45Q9Y484 360 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 ARHGAP32A7KAX9 2087 aa13.54□□□□□ -0.24
PDLIM7-210ENST00000503827 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 NCR1O76036 304 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 MYL2P10916 166 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 ETF1P62495 437 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 KCNJ10P78508 379 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 AVPI1Q5T686 147 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 TYW3Q6IPR3 259 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 C6orf120Q7Z4R8 191 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 ANKK1Q8NFD2 765 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 SLC35G5Q96KT7 338 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 PRPF18Q99633 342 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 TAPBPLQ9BX59 468 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 POLE3Q9NRF9 147 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 ZNF346Q9UL40 294 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 FIS1Q9Y3D6 152 aa13.53□□□□□ -0.24
PDLIM7-210ENST00000503827 ZNF503-AS2A6NEH8 195 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 RPL36A-HNRNPH2H7BZ11 118 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 AP3D1O14617 1153 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 CDC14BO60729 498 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 AGR2O95994 175 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 CHEK2O96017 543 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 IGHV2-5P01817 119 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 GUSBP08236 651 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 LINC00032P0C843 101 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 NAT2P11245 290 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 MAPK1P28482 360 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 RPS23P62266 143 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 TUSC1Q2TAM9 212 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 TRMT5Q32P41 509 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 MMEL1Q495T6 779 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 ATAD3BQ5T9A4 648 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 GKAP1Q5VSY0 366 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 ZYG11AQ6WRX3 759 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 RNF165Q6ZSG1 346 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 RAB8BQ92930 207 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 ADPRHL2Q9NX46 363 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 MYEF2Q9P2K5 600 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 DUSP13Q9UII6 198 aa13.52□□□□□ -0.25
PDLIM7-210ENST00000503827 A0A087WUV0 522 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-210ENST00000503827 A0A1W2PPW3 197 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms