RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 KCNK9Q9NPC2 374 aa13.92□□□□□ -0.18
MUC1-220ENST00000498431 MARCOQ9UEW3 520 aaPredicted RBP13.92□□□□□ -0.18
MUC1-220ENST00000498431 ARPC4-TTLL3A0A0A6YYG9 625 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 PRSS51A0A1B0GVH4 220 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 TMEM129A0AVI4 362 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 HMGB1P1B2RPK0 211 aaPredicted RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 ZNF587BE7ETH6 402 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 hCG_2039718K7EN88 272 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 FAAHO00519 579 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 UPK3AO75631 287 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 VENTXO95231 258 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 THBS4P35443 961 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 CHI3L1P36222 383 aaPredicted RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 CDH15P55291 814 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 MAD2L1Q13257 205 aaPredicted RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 CCNIQ14094 377 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 TTMPQ5BVD1 217 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 MRPL2Q5T653 305 aaKnown RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 CREB3L2Q70SY1 520 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 ABHD12BQ7Z5M8 362 aaPredicted RBP13.91□□□□□ -0.18
MUC1-220ENST00000498431 CMIPQ8IY22 773 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 DOK1Q99704 481 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 SLC35A5Q9BS91 424 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 DPY30Q9C005 99 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 AKTIPQ9H8T0 292 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 ADPRHL2Q9NX46 363 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 PKD1L1Q8TDX9 2849 aa13.91□□□□□ -0.18
MUC1-220ENST00000498431 SH3PXD2BA1X283 911 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 ZNF503-AS2A6NEH8 195 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 CFAP73A6NFT4 308 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 TM9SF1O15321 606 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 GKN3PP0CG01 181 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 SERPINB5P36952 375 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 RIN1Q13671 783 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
MUC1-220ENST00000498431 SPANXN4Q5MJ08 99 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 RNF130Q86XS8 419 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 EPHX4Q8IUS5 362 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 CDK20Q8IZL9 346 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 ZNF786Q8N393 782 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 NUP37Q8NFH4 326 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 OR4F15Q8NGB8 312 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 WDR60Q8WVS4 1066 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 HPS1Q92902 700 aa13.9□□□□□ -0.18
MUC1-220ENST00000498431 TRNT1Q96Q11 434 aaKnown RBP13.9□□□□□ -0.18
MUC1-220ENST00000498431 FRS3O43559 492 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 SPRY1O43609 319 aaPredicted RBP13.89□□□□□ -0.19
MUC1-220ENST00000498431 ITM2AO43736 263 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 SNUPNO95149 360 aaKnown RBP13.89□□□□□ -0.19
MUC1-220ENST00000498431 IGKV3-15P01624 115 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 NPR2P20594 1047 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 CXCR1P25024 350 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 MAP2K6P52564 334 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 ADRM1Q16186 407 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 C3orf36Q3SXR2 165 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 HSP90B2PQ58FF3 399 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 TMEM225Q6GV28 225 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 NIPAL3Q6P499 406 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 SPATA21Q7Z572 469 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 SEMA6DQ8NFY4 1073 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 MAGEE2Q8TD90 523 aaPredicted RBP13.89□□□□□ -0.19
MUC1-220ENST00000498431 NEU4Q8WWR8 484 aaPredicted RBP13.89□□□□□ -0.19
MUC1-220ENST00000498431 TESCQ96BS2 214 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 PIF1Q9H611 641 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 ZNF442Q9H7R0 627 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 MGAM2Q2M2H8 2515 aa13.89□□□□□ -0.19
MUC1-220ENST00000498431 IGHV2OR16-5A0A0B4J2B6 119 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 BPGMP07738 259 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 IFNGR1P15260 489 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 IL7RP16871 459 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 ACAA2P42765 397 aaKnown RBP13.88□□□□□ -0.19
MUC1-220ENST00000498431 SLC18A1P54219 525 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 ROR2Q01974 943 aaKnown RBP13.88□□□□□ -0.19
MUC1-220ENST00000498431 MAPK11Q15759 364 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 MSMPQ1L6U9 139 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 SMU1Q2TAY7 513 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 FAM174BQ3ZCQ3 159 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 COX20Q5RI15 118 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 ANXA8L1Q5VT79 327 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 LRRC74BQ6ZQY2 392 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 KDM8Q8N371 416 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 CADM2Q8N3J6 435 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 UBASH3BQ8TF42 649 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 TPK1Q9H3S4 243 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 METTL17Q9H7H0 456 aaPredicted RBP13.88□□□□□ -0.19
MUC1-220ENST00000498431 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 NKIRAS1Q9NYS0 192 aa13.88□□□□□ -0.19
MUC1-220ENST00000498431 TMEM229AB2RXF0 380 aa13.87□□□□□ -0.19
MUC1-220ENST00000498431 ADRA2AP08913 450 aa13.87□□□□□ -0.19
MUC1-220ENST00000498431 PRG2P13727 222 aa13.87□□□□□ -0.19
MUC1-220ENST00000498431 CDKN2CP42773 168 aa13.87□□□□□ -0.19
MUC1-220ENST00000498431 ETV4P43268 484 aa13.87□□□□□ -0.19
MUC1-220ENST00000498431 DVL1P1P54792 670 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms