RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 UQCRFS1P47985 274 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 HMGA2P52926 109 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 RAC3P60763 192 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 LTBQ06643 244 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 PMS2P3Q13401 168 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 MFSD13AQ14CX5 517 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 TRIP10Q15642 601 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 IGFBP7Q16270 282 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 FCRLAQ7L513 359 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 HIST3H2AQ7L7L0 130 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 GPAT4Q86UL3 456 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 STK32CQ86UX6 486 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 MCEMP1Q8IX19 187 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 TMEM99Q8N816 258 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 OR5J2Q8NH18 312 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 OR6S1Q8NH40 331 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 ZPLD1Q8TCW7 415 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 GNPDA2Q8TDQ7 276 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 ABHD3Q8WU67 409 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 HIST1H2ACQ93077 130 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 CIB1Q99828 191 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 NAA11Q9BSU3 229 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-227ENST00000498056 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 KLHL13Q9P2N7 655 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 TRAPPC4Q9Y296 219 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 CORINQ9Y5Q5 1042 aa12.14□□□□□ -0.47
CPNE1-227ENST00000498056 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 AQP7P3A6NL99 342 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF814B7Z6K7 855 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 C11orf98E9PRG8 122 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 PDLIM1O00151 329 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 CDC42EP2O14613 210 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 EIF1BO60739 113 aaKnown RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 OR6A2O95222 327 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 PLGP00747 810 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 ADAP00813 363 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 IGF2P01344 180 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 ADORA3P0DMS8 318 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 PRKACGP22612 351 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 GNLYP22749 145 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 FPR3P25089 353 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 PTGER4P35408 488 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 SF3B4Q15427 424 aaKnown RBP eCLIP12.13□□□□□ -0.472e-9■■■■■ 30.6
CPNE1-227ENST00000498056 ZNF770Q6IQ21 691 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 C1orf94Q6P1W5 598 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 PAQR6Q6TCH4 344 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 B3GNT6Q6ZMB0 384 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 Q6ZPB1 254 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 ZER1Q7Z7L7 766 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 OAFQ86UD1 273 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 GCNT2Q8N0V5 402 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 RPRMLQ8N4K4 120 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 SCAIQ8N9R8 606 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 GALNT11Q8NCW6 608 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 RNF128Q8TEB7 428 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 EME1Q96AY2 570 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 FEVQ99581 238 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 GABARAPL1Q9H0R8 117 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF556Q9HAH1 456 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 RNPEPL1Q9HAU8 725 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 MRPL39Q9NYK5 338 aaKnown RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 STX18Q9P2W9 335 aaKnown RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 MGAT4BQ9UQ53 548 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 ZNF175Q9Y473 711 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 FAM215AQ9Y5M1 114 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 NCOA6Q14686 2063 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 FREM1Q5H8C1 2179 aa12.13□□□□□ -0.47
CPNE1-227ENST00000498056 DIDO1Q9BTC0 2240 aaKnown RBP12.13□□□□□ -0.47
CPNE1-227ENST00000498056 HTR3EA5X5Y0 456 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 BLOC1S5-TXNDC5H3BN57 136 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 EI24O14681 340 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 RAMP1O60894 148 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 AQP8O94778 261 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 SOX14O95416 240 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 ASAH2BP0C7U1 165 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 AHCYP23526 432 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 IGFBP5P24593 272 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 PEX2P28328 305 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 SLC9A3P48764 834 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 RPL18Q07020 188 aaKnown RBP12.12□□□□□ -0.47
CPNE1-227ENST00000498056 PUDPQ08623 228 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 TSPAN31Q12999 210 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 LRRC36Q1X8D7 754 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 NSUN5P2Q63ZY6 315 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 ANKRD34AQ69YU3 496 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 TMPRSS11FQ6ZWK6 438 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 IGFN1Q86VF2 1251 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 DOLPP1Q86YN1 238 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 CCDC103Q8IW40 242 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 ADPRHL1Q8NDY3 354 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 OR51A7Q8NH64 312 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 NRBF2Q96F24 287 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 GPA33Q99795 319 aa12.12□□□□□ -0.47
CPNE1-227ENST00000498056 PSD2Q9BQI7 771 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms