RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CDC42BPBQ9Y5S2 1711 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 IQANK1A0A1B0GTG1 560 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 A0A1B0GUA9 196 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 TRIM64CA6NLI5 447 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 GJE1A6NN92 205 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 A8MXQ7 604 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 OXSR1O95747 527 aaPredicted RBP3.16□□□□□ -1.9
VPS36-206ENST00000497149 IGHV4-34P06331 123 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 ZNF853P0CG23 659 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 NUDT1P36639 197 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 MAGEA8P43361 318 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 ARRB1P49407 418 aaPredicted RBP3.16□□□□□ -1.9
VPS36-206ENST00000497149 AIF1P55008 147 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 ACTR1AP61163 376 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 CAPRIN1Q14444 709 aaKnown RBP3.16□□□□□ -1.9
VPS36-206ENST00000497149 NRF1Q16656 503 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 MARCH8Q5T0T0 291 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 Q6ZN92 141 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 RGS9BPQ6ZS82 235 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 MKXQ8IYA7 352 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 OR6C4Q8NGE1 309 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 MAGEE2Q8TD90 523 aaPredicted RBP3.16□□□□□ -1.9
VPS36-206ENST00000497149 RDH5Q92781 318 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 TIMD4Q96H15 378 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 MTMR9Q96QG7 549 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 RASL11BQ9BPW5 248 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 NAT9Q9BTE0 207 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 NT5C3AQ9H0P0 336 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 ADAM28Q9UKQ2 775 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 TMCO1Q9UM00 188 aa3.16□□□□□ -1.9
VPS36-206ENST00000497149 NSG1A0A0A6YYJ2 146 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 HSD17B6O14756 317 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 AGPAT2O15120 278 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 NBR2O15453 112 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 INSP01308 110 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 IL1BP01584 269 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 CHTF8P0CG12 524 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 IL12AP29459 219 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 CASQ1P31415 396 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 RDXP35241 583 aaKnown RBP3.15□□□□□ -1.91
VPS36-206ENST00000497149 VDAC2P45880 294 aaPredicted RBP3.15□□□□□ -1.91
VPS36-206ENST00000497149 MPPED2Q15777 294 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 KLHL38Q2WGJ6 581 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 FILIP1LQ4L180 1135 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 DHDDSQ86SQ9 333 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 TRIM69Q86WT6 500 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 RALGPS2Q86X27 583 aaPredicted RBP3.15□□□□□ -1.91
VPS36-206ENST00000497149 MFSD6LQ8IWD5 586 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 LRRC75A-AS1Q8N1F1 130 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 ZCCHC7Q8N3Z6 543 aaKnown RBP3.15□□□□□ -1.91
VPS36-206ENST00000497149 TRPV1Q8NER1 839 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 ARPC1AQ92747 370 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 CXorf40BQ96DE9 158 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 TM4SF19Q96DZ7 209 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 ZNF799Q96GE5 643 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 COPS8Q99627 209 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 ANP32EQ9BTT0 268 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 OR11A1Q9GZK7 315 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 ACTR6Q9GZN1 396 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 MCCC2Q9HCC0 563 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 BFARQ9NZS9 450 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 SEC14L3Q9UDX4 400 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 CACNG2Q9Y698 323 aa3.15□□□□□ -1.91
VPS36-206ENST00000497149 GTF3C1Q12789 2109 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 A0A0G2JLM5 398 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 PCP4L1A6NKN8 68 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 KLF8O95600 359 aaPredicted RBP3.14□□□□□ -1.91
VPS36-206ENST00000497149 ICAM2P13598 275 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 OPRD1P41143 372 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 GSSP48637 474 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 CEBPDP49716 269 aaPredicted RBP3.14□□□□□ -1.91
VPS36-206ENST00000497149 ATP1B3P54709 279 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 PLD1Q13393 1074 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 ATP6AP1Q15904 470 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 BOLA3Q53S33 107 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 CENPPQ6IPU0 288 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 PAQR7Q86WK9 346 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 ZNF679Q8IYX0 411 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 FAM71E2Q8N5Q1 922 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 EIF1ADQ8N9N8 165 aaKnown RBP3.14□□□□□ -1.91
VPS36-206ENST00000497149 OR9G1Q8NH87 305 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 C10orf35Q96D05 121 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 ITCHQ96J02 903 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 RNF167Q9H6Y7 350 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 LRRC40Q9H9A6 602 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 EXTL2Q9UBQ6 330 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 ZNF225Q9UK10 706 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 IKBKGQ9Y6K9 419 aa3.14□□□□□ -1.91
VPS36-206ENST00000497149 CLRN2A0PK11 232 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 SURF6O75683 361 aaKnown RBP3.13□□□□□ -1.91
VPS36-206ENST00000497149 RCC1P18754 421 aaPredicted RBP3.13□□□□□ -1.91
VPS36-206ENST00000497149 TBPP20226 339 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 FMO3P31513 532 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 CDK16Q00536 496 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 UNC119Q13432 240 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 OR5I1Q13606 314 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 ZNF658BQ4V348 819 aaPredicted RBP3.13□□□□□ -1.91
VPS36-206ENST00000497149 HSP90AB3PQ58FF7 597 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 ACP7Q6ZNF0 438 aa3.13□□□□□ -1.91
VPS36-206ENST00000497149 ZNF620Q6ZNG0 422 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms