RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	SGK2	Q9HBY8	427 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	SLC6A13	Q9NSD5	602 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	PIPOX	Q9P0Z9	390 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	ZDHHC8	Q9ULC8	765 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	OR6C76	A6NM76	312 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MOSPD3	O75425	235 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	PEX11B	O96011	259 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	DAO	P14920	347 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	HMGB2	P26583	209 aa	Known RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MEF2A	Q02078	507 aa	Predicted RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	CBFB	Q13951	182 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	BOP1	Q14137	746 aa	Known RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	UBE2V2	Q15819	145 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	C18orf21	Q32NC0	220 aa	Predicted RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	AARD	Q4LEZ3	155 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	FAM180A	Q6UWF9	173 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	LCTL	Q6UWM7	567 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549		Q6ZRG5	221 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	ZNF627	Q7L945	461 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	TMEM192	Q8IY95	271 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	GALNT16	Q8N428	558 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	TEX26	Q8N6G2	289 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	BRI3BP	Q8WY22	251 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	EDA	Q92838	391 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	THOC3	Q96J01	351 aa	Known RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	ZPBP	Q9BS86	351 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	CWH43	Q9H720	699 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	EXOSC3	Q9NQT5	275 aa	Known RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	PDLIM7	Q9NR12	457 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	INPP5E	Q9NRR6	644 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MRPS23	Q9Y3D9	190 aa	Known RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	TRBV2	A0A0J9YWF9	115 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	OR8G3P	P0DMU2	310 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MUC1	P15941	1255 aa	Predicted RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	IDS	P22304	550 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MSX1	P28360	303 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	NTS	P30990	170 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	DCTD	P32321	178 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	BTC	P35070	178 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	ADRA1A	P35348	466 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	CLN3	Q13286	438 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	TNFAIP1	Q13829	316 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	INPP5J	Q15735	1006 aa	Predicted RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	ACSM5	Q6NUN0	579 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	CLEC2A	Q6UVW9	174 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	FBXO16	Q8IX29	292 aa	Predicted RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MFSD9	Q8NBP5	474 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	CPEB3	Q8NE35	698 aa	Known RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	OR4K1	Q8NGD4	311 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	OR13C2	Q8NGS9	318 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	THAP4	Q8WY91	577 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	ECHDC3	Q96DC8	303 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	SENP5	Q96HI0	755 aa	Predicted RBP	7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	TECTB	Q96PL2	329 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	F2RL3	Q96RI0	385 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	OR11A1	Q9GZK7	315 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	LAT2	Q9GZY6	243 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	TUBA4B	Q9H853	241 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	MYNN	Q9NPC7	610 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	GSKIP	Q9P0R6	139 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	KLK11	Q9UBX7	282 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	LPAR3	Q9UBY5	353 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	FBXW2	Q9UKT8	454 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	OARD1	Q9Y530	152 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	PCDHGA1	Q9Y5H4	931 aa		7.59	□□□□□ -1.19
CRNKL1-205	ENST00000496549	NUP214	P35658	2090 aa	Predicted RBP	7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	HEPACAM2	A8MVW5	462 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	ANHX	E9PGG2	379 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	CLDN5	O00501	218 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	YY2	O15391	372 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	SLURP2	P0DP57	97 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	PGAM2	P15259	253 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	TACR1	P25103	407 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	ELAVL4	P26378	380 aa	Known RBP	7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	HOXC8	P31273	242 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	THBS4	P35443	961 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	PNLIPRP2	P54317	469 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	HTRA3	P83110	453 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	HYAL4	Q2M3T9	481 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	SLC35D3	Q5M8T2	416 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	C17orf64	Q86WR6	236 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	TMPRSS12	Q86WS5	348 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	CMTM4	Q8IZR5	234 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	SLC35G3	Q8N808	338 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	SDR9C7	Q8NEX9	313 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	OR8J2	Q8NGG1	315 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	OR51S1	Q8NGJ8	323 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	OR4C15	Q8NGM1	316 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	OR5R1	Q8NH85	324 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	APIP	Q96GX9	242 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	OR5B12	Q96R08	314 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	AIF1L	Q9BQI0	150 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	POFUT1	Q9H488	388 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	ASB8	Q9H765	288 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	TAF9B	Q9HBM6	251 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	DKKL1	Q9UK85	242 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	NEU3	Q9UQ49	428 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	TMED3	Q9Y3Q3	217 aa		7.58	□□□□□ -1.2
CRNKL1-205	ENST00000496549	TRBV5-3	A0A0A0MS03	114 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms