RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CBLN3Q6UW01 205 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 PIWIL3Q7Z3Z3 882 aaKnown RBP7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ZAR1Q86SH2 424 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 GTPBP3Q969Y2 492 aaKnown RBP7.78□□□□□ -1.16
U2AF1-212ENST00000496462 RELTQ969Z4 430 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 SFXN3Q9BWM7 321 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CCNB1IP1Q9NPC3 277 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 LYVE1Q9Y5Y7 322 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CLCA1A8K7I4 914 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CASQ2O14958 399 aaPredicted RBP7.78□□□□□ -1.16
U2AF1-212ENST00000496462 IDH3BO43837 385 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 IGHG3P01860 377 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CTSSP25774 331 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 POU3F1Q03052 451 aaPredicted RBP7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ATP6AP1Q15904 470 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 SNAPC1Q16533 368 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 EXOC3L2Q2M3D2 409 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 VASNQ6EMK4 673 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 DPPA2Q7Z7J5 298 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.78□□□□□ -1.16
U2AF1-212ENST00000496462 STEAP2Q8NFT2 490 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 OR2T33Q8NG76 320 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 OR51A7Q8NH64 312 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF570Q96NI8 536 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 TSSK6Q9BXA6 273 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ULBP2Q9BZM5 246 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ZDHHC11Q9H8X9 412 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 DSPPQ9NZW4 1301 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 A0A1W2PNR3 127 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 FTCDNL1E5RQL4 147 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 YES1P07947 543 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 BMP4P12644 408 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CHRNB4P30926 498 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 UQCRC1P31930 480 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 MVDP53602 400 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 MYBPHQ13203 477 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 RIPPLY2Q5TAB7 128 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 FJX1Q86VR8 437 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 DHRSXQ8N5I4 330 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CYGBQ8WWM9 190 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 MIB2Q96AX9 1013 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 MESP1Q9BRJ9 268 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 CLN6Q9NWW5 311 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 ZNF226Q9NYT6 803 aa7.78□□□□□ -1.16
U2AF1-212ENST00000496462 NOTCH2Q04721 2471 aa7.77□□□□□ -1.16
U2AF1-212ENST00000496462 SH3BGRP55822 239 aaPredicted RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 CLDN17P56750 224 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 NIPAL3Q6P499 406 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 AMIGO2Q86SJ2 522 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 CCDC36Q8IYA8 594 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 FAM86B1Q8N7N1 296 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 WDSUB1Q8N9V3 476 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 ZNF566Q969W8 418 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 ERMAPQ96PL5 475 aaPredicted RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 ARMC1Q9NVT9 282 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 TMEM200CA6NKL6 621 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 EPPINO95925 133 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 APOC1P02654 83 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 TNFRSF1BP20333 461 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SLC34A1Q06495 639 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 TSPAN31Q12999 210 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 ADRM1Q16186 407 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 MICAQ29983 383 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 OR7E24Q6IFN5 339 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 ADCK1Q86TW2 530 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 GALNT4Q8N4A0 578 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 OR1J2Q8NGS2 313 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 OR2T4Q8NH00 348 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 MAGEE2Q8TD90 523 aaPredicted RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 TIMP4Q99727 224 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SEC61A2Q9H9S3 476 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SLC52A3Q9NQ40 469 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 GMPPBQ9Y5P6 360 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 CDH10Q9Y6N8 788 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 PRRC2CQ9Y520 2896 aaKnown RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SMG1Q96Q15 3661 aaKnown RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 CFAP46Q8IYW2 2715 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 ZFHX4Q86UP3 3567 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 TMEM72A0PK05 275 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 CD8B2A6NJW9 211 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 CLDN24A6NM45 220 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 DIRAS1O95057 198 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 C4orf17Q53FE4 359 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SLC25A53Q5H9E4 307 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SLC27A4Q6P1M0 643 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 PODNL1Q6PEZ8 512 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SHQ1Q6PI26 577 aaKnown RBP7.77□□□□□ -1.17
U2AF1-212ENST00000496462 SMARCD3Q6STE5 483 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 PACRGLQ8N7B6 248 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 OR9Q1Q8NGQ5 310 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 OR6K3Q8NGY3 331 aa7.77□□□□□ -1.17
U2AF1-212ENST00000496462 M0R082 166 aa7.76□□□□□ -1.17
U2AF1-212ENST00000496462 AKR7A3O95154 331 aa7.76□□□□□ -1.17
U2AF1-212ENST00000496462 RAB36O95755 333 aa7.76□□□□□ -1.17
U2AF1-212ENST00000496462 OCM2P0CE71 109 aa7.76□□□□□ -1.17
U2AF1-212ENST00000496462 OCMP0CE72 109 aaPredicted RBP7.76□□□□□ -1.17
U2AF1-212ENST00000496462 ACVR1BP36896 505 aa7.76□□□□□ -1.17
U2AF1-212ENST00000496462 ESRRGP62508 458 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms