RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 A4GALTQ9NPC4 353 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 SLC52A3Q9NQ40 469 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 SLC17A5Q9NRA2 495 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 VAPAQ9P0L0 249 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 RPS6KB2Q9UBS0 482 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 MALT1Q9UDY8 824 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 B3GALT5Q9Y2C3 310 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 ATP23Q9Y6H3 246 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 ABCA1O95477 2261 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 AQP7P3A6NL99 342 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 ELOA3DA6NLF2 546 aaPredicted RBP8.41□□□□□ -1.06
MSH5-218ENST00000494646 PDLIM1O00151 329 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 TMCC2O75069 709 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 IGHV4-39P01824 125 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 ARAFP10398 606 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 BMP2P12643 396 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 MPGP29372 298 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 AQP1P29972 269 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 TTKP33981 857 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 P2RY4P51582 365 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 SLC25A3Q00325 362 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 CDK6Q00534 326 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 EGR4Q05215 589 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 FADDQ13158 208 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 OCLNQ16625 522 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 ELOA3BQ3SY89 546 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 HIKESHIQ53FT3 197 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 LRIF1Q5T3J3 769 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 GCNT6Q5T4J0 391 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 AGAP6Q5VW22 663 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 PRAMEF8Q5VWM4 474 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 PRAMEF7Q5VXH5 474 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 NIPAL3Q6P499 406 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 B3GLCTQ6Y288 498 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 COMTD1Q86VU5 262 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 EPHX4Q8IUS5 362 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 ELOA3Q8NG57 546 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 STK35Q8TDR2 534 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 TAAR8Q969N4 342 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 TMEM45BQ96B21 275 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 HS6ST2Q96MM7 605 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 DHRS9Q9BPW9 319 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 SF3B5Q9BWJ5 86 aaKnown RBP8.41□□□□□ -1.06
MSH5-218ENST00000494646 CACNG6Q9BXT2 260 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 REG4Q9BYZ8 158 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 IKZF5Q9H5V7 419 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 INTS9Q9NV88 658 aaKnown RBP8.41□□□□□ -1.06
MSH5-218ENST00000494646 FAIMQ9NVQ4 179 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 SEC14L4Q9UDX3 406 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.41□□□□□ -1.06
MSH5-218ENST00000494646 MGAT4BQ9UQ53 548 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 HIVEP2P31629 2446 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 ARFGEF3Q5TH69 2177 aa8.41□□□□□ -1.06
MSH5-218ENST00000494646 A0A1B0GWA3 101 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 EVPLLA8MZ36 301 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 NPIPB7O75200 414 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 UPK3AO75631 287 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 VAMP5O95183 116 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 AHSA1O95433 338 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 LGI1O95970 557 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 PNMTP11086 282 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 ETS2P15036 469 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.06
MSH5-218ENST00000494646 CLDN17P56750 224 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 PRPS1P60891 318 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 TUBA1BP68363 451 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 TUBA4AP68366 448 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 IRX1P78414 480 aaPredicted RBP8.4□□□□□ -1.06
MSH5-218ENST00000494646 PPP2R2BQ00005 443 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 TGFBR3Q03167 851 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 SCARB2Q14108 478 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 REEP3Q6NUK4 255 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 TUBA1AQ71U36 451 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 LINGO2Q7L985 606 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 SSX8Q7RTT4 187 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 HDXQ7Z353 690 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 FBXL14Q8N1E6 418 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 POMGNT2Q8NAT1 580 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 MFSD8Q8NHS3 518 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 CKAP2Q8WWK9 683 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 WFDC6Q9BQY6 131 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 PTDSS2Q9BVG9 487 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 TMEM45AQ9NWC5 275 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 PRDM4Q9UKN5 801 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 AMDHD2Q9Y303 409 aa8.4□□□□□ -1.06
MSH5-218ENST00000494646 CHD3Q12873 2000 aaKnown RBP8.4□□□□□ -1.06
MSH5-218ENST00000494646 RTTNQ86VV8 2226 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 A0A096LPE4 126 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 TRBV5-3A0A0A0MS03 114 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 FTCDNL1E5RQL4 147 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 WNT11O96014 354 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 ZNF43P17038 809 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 PPIBP23284 216 aaKnown RBP8.39□□□□□ -1.07
MSH5-218ENST00000494646 SLC6A2P23975 617 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 HTR2AP28223 471 aa8.39□□□□□ -1.07
MSH5-218ENST00000494646 GTF2E2P29084 291 aaKnown RBP8.39□□□□□ -1.07
MSH5-218ENST00000494646 GRPRP30550 384 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms