RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 BCHEP06276 602 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 LYNP07948 512 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 TFPTP0C1Z6 253 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 IL7RP16871 459 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 PSMB1P20618 241 aaKnown RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ENPP1P22413 925 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 RYKP34925 604 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 HTR3AP46098 478 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 CLK1P49759 484 aaKnown RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 DIO1P49895 249 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 PCBP3P57721 371 aaKnown RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 CSNK2A1P68400 391 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 SCARB2Q14108 478 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 POU4F3Q15319 338 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 EXOC3L2Q2M3D2 409 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 MRPL2Q5T653 305 aaKnown RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 UGT2A3Q6UWM9 527 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 TFAP2EQ6VUC0 442 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 STAC2Q6ZMT1 411 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 TMPPEQ6ZT21 453 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF550Q7Z398 422 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 PIWIL3Q7Z3Z3 882 aaKnown RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 TUSC5Q8IXB3 177 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF440Q8IYI8 595 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 SLC38A5Q8WUX1 472 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 HSH2DQ96JZ2 352 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 PSD2Q9BQI7 771 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ANKRD60Q9BZ19 345 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 C12orf49Q9H741 205 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 IL1RAPQ9NPH3 570 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 CTPS2Q9NRF8 586 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ADPRHL2Q9NX46 363 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ING1Q9UK53 422 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 PLEKHA6Q9Y2H5 1048 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 F8P00451 2351 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 ABCA4P78363 2273 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 IGHV3-15A0A0B4J1V0 119 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 CDHR4A6H8M9 788 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 DLGAP1O14490 977 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 AP3D1O14617 1153 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 PMS2P2O95744 297 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF682O95780 498 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 IFNA14P01570 189 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 FABP3P05413 133 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 YES1P07947 543 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 THBS1P07996 1170 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF23P17027 643 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ALDH3A2P51648 485 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 MAP2K6P52564 334 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 GTF2A1P52655 376 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-209ENST00000494464 CHN2P52757 468 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 CRYBA2P53672 197 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 CDK6Q00534 326 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 EPS8Q12929 822 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 DAG1Q14118 895 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ZSWIM7Q19AV6 140 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 LIN52Q52LA3 116 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 C6orf52Q5T4I8 152 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 PRAMEF8Q5VWM4 474 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 PRAMEF7Q5VXH5 474 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ABLIM2Q6H8Q1 611 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 CARM1Q86X55 608 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ZDHHC21Q8IVQ6 265 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 GABRG1Q8N1C3 465 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 TFAP2CQ92754 450 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 ALPK1Q96QP1 1244 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 OSBPL10Q9BXB5 764 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 SMPD3Q9NY59 655 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-209ENST00000494464 USE1Q9NZ43 259 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 GPR52Q9Y2T5 361 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 HDGFL3Q9Y3E1 203 aa11.72□□□□□ -0.53
ERCC3-209ENST00000494464 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-209ENST00000494464 PRRC2AP48634 2157 aaKnown RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 A0A0G2JPF8 293 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 TMEM247A6NEH6 219 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF724A8MTY0 619 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 HNRNPCL2B2RXH8 293 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 HNRNPCL3B7ZW38 293 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 PDLIM1O00151 329 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 SULT2B1O00204 365 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 GCM2O75603 506 aaPredicted RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ATE1O95260 518 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 FESP07332 822 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 HNRNPCL4P0DMR1 293 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 SLC1A3P43003 542 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 IDH2P48735 452 aaKnown RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 POLR2HP52434 150 aaKnown RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 RASGEF1BQ0VAM2 473 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 CYBRD1Q53TN4 286 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF836Q6ZNA1 936 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 C22orf34Q6ZV56 151 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 NUFIP2Q7Z417 695 aaKnown RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ADGRG3Q86Y34 549 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 ZDHHC13Q8IUH4 622 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 OR52P1PQ8NH57 321 aa11.71□□□□□ -0.53
ERCC3-209ENST00000494464 OR5K1Q8NHB7 308 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms