RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 NANSQ9NR45 359 aa6.14□□□□□ -1.43
MSH5-217ENST00000494458 MED11Q9P086 117 aa6.14□□□□□ -1.43
MSH5-217ENST00000494458 KLHL21Q9UJP4 597 aa6.14□□□□□ -1.43
MSH5-217ENST00000494458 GPR52Q9Y2T5 361 aa6.14□□□□□ -1.43
MSH5-217ENST00000494458 CORINQ9Y5Q5 1042 aa6.14□□□□□ -1.43
MSH5-217ENST00000494458 PCNX3Q9H6A9 2034 aa6.14□□□□□ -1.43
MSH5-217ENST00000494458 CFAP54Q96N23 3096 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 AHCTF1Q8WYP5 2266 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 SPAARA0A1B0GVQ0 90 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 SLC22A31A6NKX4 558 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 MS4A18H0YCH9 400 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 KPNA4O00629 521 aaPredicted RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 PLPP3O14495 311 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 SLC30A4O14863 429 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ATE1O95260 518 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 FADS2O95864 444 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 CCL3P10147 92 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 LIFP15018 202 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 HIST1H1CP16403 213 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 ITPKBP27987 946 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 SDHAP31040 664 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 LIPAP38571 399 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 AQP2P41181 271 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 RGS6P49758 472 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 DIO1P49895 249 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ST13P50502 369 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 P2RY4P51582 365 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 CDH11P55287 796 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 PRSS12P56730 875 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 H3F3AP84243 136 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 RPL18Q07020 188 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 GPR50Q13585 617 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 MS4A18Q3C1V0 323 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 SLC35D3Q5M8T2 416 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ACER2Q5QJU3 275 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 DCAF10Q5QP82 559 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 LINC01590Q5TEZ4 76 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 C1orf140Q5VVS0 124 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 TIGD3Q6B0B8 471 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ASB18Q6ZVZ8 466 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 CXXC5Q7LFL8 322 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 ASCL5Q7RTU5 278 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 MAMDC2Q7Z304 686 aaPredicted RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 RAB43Q86YS6 212 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 CLVS1Q8IUQ0 354 aaPredicted RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 GALNT15Q8N3T1 639 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 STX19Q8N4C7 294 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 BBS1Q8NFJ9 593 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 OR5J2Q8NH18 312 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 MOSPD2Q8NHP6 518 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ZNF563Q8TA94 476 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ASB15Q8WXK1 588 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ZBTB8AQ96BR9 441 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 RNFT2Q96EX2 444 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 OR5M11Q96RB7 305 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 ARHGAP9Q9BRR9 750 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 IFT27Q9BW83 186 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 NAA50Q9GZZ1 169 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 CXorf56Q9H5V9 222 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 MARCH7Q9H992 704 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 SIAEQ9HAT2 523 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 INPP5EQ9NRR6 644 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 FAM86C1Q9NVL1 165 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 DLL3Q9NYJ7 618 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 PPP4R1LQ9P1A2 415 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 IL17BQ9UHF5 180 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 CLEC2DQ9UHP7 191 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 FBXL2Q9UKC9 423 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 TRAPPC4Q9Y296 219 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 EXOSC1Q9Y3B2 195 aaKnown RBP6.13□□□□□ -1.43
MSH5-217ENST00000494458 MUC6Q6W4X9 2439 aa6.13□□□□□ -1.43
MSH5-217ENST00000494458 A0A1W2PNV4 684 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 OR6C68A6NDL8 312 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 LIPT2A6NK58 231 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 RIIAD1A6NNX1 92 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 PRR23D1E9PI22 279 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 GNB5O14775 395 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 AHCYL1O43865 530 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CBR3O75828 277 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 PPP1R3DO95685 299 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 RAB36O95755 333 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 IFNGP01579 166 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 SBK2P0C263 348 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 PRR23D2P0DMB1 279 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 IMPDH2P12268 514 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ZNF17P17021 662 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ZNF3P17036 446 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 PTNP21246 168 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 NOS3P29474 1203 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 OTX2P32243 289 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 UGT2B10P36537 528 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CDKN2AP42771 156 aaKnown RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 CAPZA2P47755 286 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 ETV1P50549 477 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 CCR4P51679 360 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 DSCR4P56555 118 aaPredicted RBP6.12□□□□□ -1.43
MSH5-217ENST00000494458 B3GALT5-AS1P59052 145 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 GABREP78334 506 aa6.12□□□□□ -1.43
MSH5-217ENST00000494458 BDH1Q02338 343 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms