RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 HNRNPCL3B7ZW38 293 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 HNRNPCL1O60812 293 aaKnown RBP20.83■□□□□ 0.93
TTC3-224ENST00000494243 VAMP5O95183 116 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 LGI1O95970 557 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 F12P00748 615 aaPredicted RBP20.83■□□□□ 0.93
TTC3-224ENST00000494243 IFNA2P01563 188 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 HNRNPCL4P0DMR1 293 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 BMP4P12644 408 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 LARS2Q15031 903 aaKnown RBP20.83■□□□□ 0.93
TTC3-224ENST00000494243 ZSWIM7Q19AV6 140 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 TBRG1Q3YBR2 411 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 KLHL24Q6TFL4 600 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 ABHD12BQ7Z5M8 362 aaPredicted RBP20.83■□□□□ 0.93
TTC3-224ENST00000494243 OR9I1Q8NGQ6 314 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 OR1K1Q8NGR3 316 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 MGARPQ8TDB4 240 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 PROX1Q92786 737 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 BCL2L2Q92843 193 aaPredicted RBP20.83■□□□□ 0.93
TTC3-224ENST00000494243 ITCHQ96J02 903 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 OR52B2Q96RD2 323 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 OBP2BQ9NPH6 170 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 ZNF232Q9UNY5 417 aa20.83■□□□□ 0.93
TTC3-224ENST00000494243 CUBNO60494 3623 aa20.83■□□□□ 0.92
TTC3-224ENST00000494243 ARFGEF3Q5TH69 2177 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 FTCDNL1E5RQL4 147 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 ANP32DO95626 131 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 NCF2P19878 526 aaPredicted RBP20.82■□□□□ 0.92
TTC3-224ENST00000494243 MSANTD1Q6ZTZ1 278 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 STK35Q8TDR2 534 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 FBXO17Q96EF6 278 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 PTDSS2Q9BVG9 487 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 RSPO3Q9BXY4 272 aaPredicted RBP20.82■□□□□ 0.92
TTC3-224ENST00000494243 RMND5AQ9H871 391 aa20.82■□□□□ 0.92
TTC3-224ENST00000494243 A0A096LPI6 279 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 RNF212BA8MTL3 300 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 KRT33AO76009 404 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 NUDT7P0C024 238 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 POLR2JP52435 117 aaKnown RBP20.81■□□□□ 0.92
TTC3-224ENST00000494243 SLC18A1P54219 525 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 EGR4Q05215 589 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 PRAMEF8Q5VWM4 474 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 PRAMEF7Q5VXH5 474 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 ATG16L1Q676U5 607 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 MFSD8Q8NHS3 518 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 SLC38A2Q96QD8 506 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 NELFAQ9H3P2 528 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 THUMPD1Q9NXG2 353 aaKnown RBP20.81■□□□□ 0.92
TTC3-224ENST00000494243 RASD1Q9Y272 281 aa20.81■□□□□ 0.92
TTC3-224ENST00000494243 VWC2LB2RUY7 222 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 ZNF587BE7ETH6 402 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 NR5A2O00482 541 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 UPK3AO75631 287 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 CSF3P09919 207 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 FAM157CP0CG43 387 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 IGHV4-31P0DP07 118 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 HOXC5Q00444 222 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 RGNQ15493 299 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 NIPAL3Q6P499 406 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 PHC2Q8IXK0 858 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 KDM8Q8N371 416 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 GTF2H4Q92759 462 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 SORCS2Q96PQ0 1159 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 ALKBH3Q96Q83 286 aaPredicted RBP20.8■□□□□ 0.92
TTC3-224ENST00000494243 KCNK17Q96T54 332 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 REPIN1Q9BWE0 567 aaKnown RBP20.8■□□□□ 0.92
TTC3-224ENST00000494243 PAIP1Q9H074 479 aaKnown RBP20.8■□□□□ 0.92
TTC3-224ENST00000494243 BCL2L10Q9HD36 194 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 TMEM160Q9NX00 188 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 CRNNQ9UBG3 495 aaPredicted RBP20.8■□□□□ 0.92
TTC3-224ENST00000494243 CDC42EP3Q9UKI2 254 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 IFT52Q9Y366 437 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 PCDHB14Q9Y5E9 798 aa20.8■□□□□ 0.92
TTC3-224ENST00000494243 ARPC4-TTLL3A0A0A6YYG9 625 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 UBDO15205 165 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 PNMTP11086 282 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 BMP2P12643 396 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 HOXB9P17482 250 aaPredicted RBP20.79■□□□□ 0.92
TTC3-224ENST00000494243 USF1P22415 310 aaPredicted RBP20.79■□□□□ 0.92
TTC3-224ENST00000494243 ZNF311Q5JNZ3 666 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 C6orf10Q5SRN2 563 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 CYB5R2Q6BCY4 276 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 MAGEE2Q8TD90 523 aaPredicted RBP20.79■□□□□ 0.92
TTC3-224ENST00000494243 MAL2Q969L2 176 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 KTI12Q96EK9 354 aaPredicted RBP20.79■□□□□ 0.92
TTC3-224ENST00000494243 KATNB1Q9BVA0 655 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 LINC00470Q9BZP3 86 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 ARMC7Q9H6L4 198 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 A4GALTQ9NPC4 353 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 CA10Q9NS85 328 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 STAB1Q9NY15 2570 aa20.79■□□□□ 0.92
TTC3-224ENST00000494243 OR6C65A6NJZ3 312 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 FZD7O75084 574 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 ZNF432O94892 652 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 AHSA1O95433 338 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 SERPINF1P36955 418 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 RPS5P46782 204 aaKnown RBP20.78■□□□□ 0.92
TTC3-224ENST00000494243 TUBA1BP68363 451 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 TUBA4AP68366 448 aa20.78■□□□□ 0.92
TTC3-224ENST00000494243 LSM11P83369 360 aaKnown RBP eCLIP20.78■□□□□ 0.922e-18■■■□□ 16.7
TTC3-224ENST00000494243 ANKRD16Q6P6B7 361 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms