RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 CLEC18CQ8NCF0 446 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 ACOT11Q8WXI4 607 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 DHRS1Q96LJ7 313 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 HS6ST2Q96MM7 605 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF347Q96SE7 839 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 PSD2Q9BQI7 771 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 NAA11Q9BSU3 229 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 SLC19A3Q9BZV2 496 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 VNN3Q9NY84 501 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 WIPF3A6NGB9 483 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 AQP7P3A6NL99 342 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 FAM90A27PA6NNH2 459 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 UMPSP11172 480 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 NQO1P15559 274 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 CTSSP25774 331 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 RNPS1Q15287 305 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 SLC43A2Q8N370 569 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 SSC4DQ8WTU2 575 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 NANSQ9NR45 359 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 U3KQV3 271 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 FKBP6O75344 327 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 IFI30P13284 250 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 MAKP20794 623 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 CHRNB4P30926 498 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 LAPTM4AQ15012 233 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 GUSBP1Q15486 140 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 LRRK2Q5S007 2527 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 GTF2IRD2BQ6EKJ0 949 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 TMEM225Q6GV28 225 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 FAM214BQ7L5A3 538 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 SLC46A3Q7Z3Q1 461 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 GTF2IRD2Q86UP8 949 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 CA5BP1Q8WTZ4 195 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 POP5Q969H6 163 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 BPIFA2Q96DR5 249 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 GMPPAQ96IJ6 420 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 FUZQ9BT04 418 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 KLHL4Q9C0H6 718 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 ANKRD19PQ9H560 264 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 CCM2LQ9NUG4 571 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 KLHL9Q9P2J3 617 aa15.92■□□□□ 0.14
PDLIM7-208ENST00000493815 NCOA6Q14686 2063 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF716A6NP11 495 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 SS18L1O75177 396 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 AGTR1P30556 359 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 GPR4P46093 362 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 CTBP2P56545 445 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 IL1RL1Q01638 556 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 PMS2P3Q13401 168 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 EXOC3L2Q2M3D2 409 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 OR2T5Q6IEZ7 315 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 MBOAT2Q6ZWT7 520 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 H1FNTQ75WM6 255 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 RRM2BQ7LG56 351 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 NUFIP2Q7Z417 695 aaKnown RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 BTLAQ7Z6A9 289 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 RELL2Q8NC24 303 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 OR4K5Q8NGD3 323 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 OR2T29Q8NH02 315 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 PIGXQ8TBF5 258 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 STARD4Q96DR4 205 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 SGTBQ96EQ0 304 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 ZFP3Q96NJ6 502 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 RAB3IPQ96QF0 476 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 ALPK1Q96QP1 1244 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 ASPNQ9BXN1 380 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 C12orf49Q9H741 205 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 CHST11Q9NPF2 352 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 LYVE1Q9Y5Y7 322 aa15.91■□□□□ 0.14
PDLIM7-208ENST00000493815 SH3PXD2BA1X283 911 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 NKX2-6A6NCS4 301 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 EEF1E1-BLOC1S5C9J1V9 151 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 EEF1E1O43324 174 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 TIPRLO75663 272 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 SMNDC1O75940 238 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 OR7A10O76100 309 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 HPRP00739 348 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 CST1P01037 141 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 YES1P07947 543 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 NTF4P34130 210 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 IST1P53990 364 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 SMIM11AP58511 58 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 SLC17A1Q14916 467 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 MAMDC2Q7Z304 686 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF808Q8N4W9 903 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 OR6S1Q8NH40 331 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 SFXN3Q9BWM7 321 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 DENND2DQ9H6A0 471 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 FKRPQ9H9S5 495 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF629Q9UEG4 869 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 CORINQ9Y5Q5 1042 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 ADGRG4Q8IZF6 3080 aa15.9■□□□□ 0.14
PDLIM7-208ENST00000493815 MS4A18H0YCH9 400 aa15.89■□□□□ 0.13
PDLIM7-208ENST00000493815 TNFRSF11BO00300 401 aa15.89■□□□□ 0.13
PDLIM7-208ENST00000493815 DVL2O14641 736 aa15.89■□□□□ 0.13
PDLIM7-208ENST00000493815 FZD7O75084 574 aa15.89■□□□□ 0.13
PDLIM7-208ENST00000493815 MT-ATP6P00846 226 aa15.89■□□□□ 0.13
PDLIM7-208ENST00000493815 ASAH2BP0C7U1 165 aa15.89■□□□□ 0.13
PDLIM7-208ENST00000493815 HLA-DOBP13765 273 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms