RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 OIT3Q8WWZ8 545 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
SMPD4-219ENST00000491128 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
SMPD4-219ENST00000491128 TEX12Q9BXU0 123 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 TAS2R5Q9NYW4 299 aa12.58□□□□□ -0.4
SMPD4-219ENST00000491128 H2AFY2Q9P0M6 372 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-219ENST00000491128 RSL24D1Q9UHA3 163 aaKnown RBP12.58□□□□□ -0.4
SMPD4-219ENST00000491128 ATMQ13315 3056 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 SPTBN4Q9H254 2564 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 TRAV36DV7A0A075B6V5 113 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 PINLYPA6NC86 204 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 EFCAB10A6NFE3 127 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 A8MVM7 634 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 PRR23D1E9PI22 279 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 H0YC42 278 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 M0R082 166 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 HIST1H2ABP04908 130 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 HMGN1P05114 100 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 PRR23D2P0DMB1 279 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 CDK4P11802 303 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 CSNK2BP67870 215 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 HIST3H2AQ7L7L0 130 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF417Q8TAU3 575 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 TMEM234Q8WY98 164 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 HIST1H2ACQ93077 130 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF587Q96SQ5 575 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 SLC19A3Q9BZV2 496 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 CCNB1IP1Q9NPC3 277 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 KDM4EB2RXH2 506 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 NPIPB7O75200 414 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 ATE1O95260 518 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 JUNBP17275 347 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 CD96P40200 585 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 CDKN2AP42771 156 aaKnown RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 PSPHP78330 225 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 SOWAHCQ53LP3 525 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 RAB43Q86YS6 212 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 PLCZ1Q86YW0 608 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 PSD4Q8NDX1 1056 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 ZMYND19Q96E35 227 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-219ENST00000491128 C1GALT1C1Q96EU7 318 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 TMEM80Q96HE8 168 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 SDHAF3Q9NRP4 125 aa12.57□□□□□ -0.4
SMPD4-219ENST00000491128 OR6C68A6NDL8 312 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 MAGEB4O15481 346 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 RNF13O43567 381 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 GPANK1O95872 356 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 ENDOUP21128 410 aaKnown RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 DPP4P27487 766 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 GSTT1P30711 240 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 CYB561P49447 251 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 MELKQ14680 651 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 WDFY1Q8IWB7 410 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 LSM14AQ8ND56 463 aaKnown RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 OR1J4Q8NGS1 313 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 KIAA1143Q96AT1 154 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 ANGPTL4Q9BY76 406 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 PRRG3Q9BZD7 231 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 CCDC86Q9H6F5 360 aaKnown RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 SH2D2AQ9NP31 389 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 NRIP3Q9NQ35 241 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 ASB6Q9NWX5 421 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 LRFN1Q9P244 771 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 HIF3AQ9Y2N7 669 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 AKR7A3O95154 331 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 WDPCPO95876 746 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 IMPDH2P12268 514 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 HK1P19367 917 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 ACVR2AP27037 513 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 LIMK1P53667 647 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 TIGD6Q17RP2 521 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 FAM69AQ5T7M9 428 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 RAET1LQ5VY80 246 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 MEDAGQ5VYS4 303 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 NIPAL3Q6P499 406 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 TMPRSS7Q7RTY8 843 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 YRDCQ86U90 279 aaKnown RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 CLEC1AQ8NC01 280 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 GATAD2BQ8WXI9 593 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 SRA1Q9HD15 236 aaKnown RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 RPRD1BQ9NQG5 326 aaKnown RBP12.56□□□□□ -0.4
SMPD4-219ENST00000491128 PCDHGB1Q9Y5G3 927 aa12.56□□□□□ -0.4
SMPD4-219ENST00000491128 TRABD2BA6NFA1 517 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 H3BMQ9 156 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 DCTN6O00399 190 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 FOXD2O60548 495 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 AHSA1O95433 338 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 P04436 131 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF3P17036 446 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 UQCRC1P31930 480 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 GRK5P34947 590 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms