RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 AKR1E2Q96JD6 320 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TESK2Q96S53 571 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TMEM121Q9BTD3 319 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TRIM62Q9BVG3 475 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 DHX33Q9H6R0 707 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 ISG20L2Q9H9L3 353 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 GPN2Q9H9Y4 310 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 UFSP2Q9NUQ7 469 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 NUDT15Q9NV35 164 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 CD300AQ9UGN4 299 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TBC1D24Q9ULP9 559 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 RNF6Q9Y252 685 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 METP08581 1390 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 PPIAL4CA0A0B4J2A2 164 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 GABRR3A8MPY1 467 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 HIP1O00291 1037 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 CDX4O14627 284 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 LATO43561 262 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NIPSNAP2O75323 286 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 LYPLA1O75608 230 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 SCRG1O75711 98 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 CLPXO76031 633 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 TSPAN12O95859 305 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 PLEKP08567 350 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 PPIAL4GP0DN37 164 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NTSP30990 170 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NAMPTP43490 491 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 CCT3P49368 545 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 RAB9AP51151 201 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 BLVRAP53004 296 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 YWHAEP62258 255 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 XIAPP98170 497 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 GANABQ14697 944 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 TGFBIQ15582 683 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZNF829Q3KNS6 432 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 ALKBH6Q3KRA9 238 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR2B11Q5JQS5 317 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 MLIPQ5VWP3 458 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 TMEM53Q6P2H8 277 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NLRP9Q7RTR0 991 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 HSD17B13Q7Z5P4 300 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZNF100Q8IYN0 542 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 CEND1Q8N111 149 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 FAM83FQ8NEG4 500 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR4K14Q8NGD5 310 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR9A4Q8NGU2 314 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 LRRC20Q8TCA0 184 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 CCDC12Q8WUD4 166 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 RPL3LQ92901 407 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NEIL2Q969S2 332 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZNF707Q96C28 371 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 IMMP1LQ96LU5 166 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 TECTBQ96PL2 329 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 TRNT1Q96Q11 434 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 SMIM14Q96QK8 99 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 LLPHQ9BRT6 129 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NICN1Q9BSH3 213 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 MCCC2Q9HCC0 563 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 RAB18Q9NP72 206 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 STX18Q9P2W9 335 aaKnown RBP3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 CYTH4Q9UIA0 394 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 ADAM28Q9UKQ2 775 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 NPTNQ9Y639 398 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 MYO3BQ8WXR4 1341 aa3.42□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR6C65A6NJZ3 312 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 DUX1O43812 170 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 GPX5O75715 221 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 HBQ1P09105 142 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 XRCC1P18887 633 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 NT5EP21589 574 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 TUBG1P23258 451 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 CASP14P31944 242 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 GCKP35557 465 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 WNT4P56705 351 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 RIPPLY3P57055 190 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 DAOAP59103 153 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 RAB11AP62491 216 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 CTAG1AP78358 180 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 ORC2Q13416 577 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 RAB11BQ15907 218 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SYPL1Q16563 259 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 AANATQ16613 207 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 C6orf226Q5I0X4 101 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR2A2Q6IF42 318 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 DNM1P46Q6ZS02 220 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 LANCL3Q6ZV70 420 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 CYS1Q717R9 158 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SSX9Q7RTT3 188 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SERPINA9Q86WD7 417 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 TGIF2LYQ8IUE0 185 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SLC38A6Q8IZM9 456 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 GTPBP8Q8N3Z3 284 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZNF596Q8TC21 504 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 CD300LFQ8TDQ1 290 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SLC38A4Q969I6 547 aa3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 SH3YL1Q96HL8 342 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P38-201ENST00000490557 NOL4LQ96MY1 436 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms