RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 GDF1P27539 372 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 IFNGR2P38484 337 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 EEF1A1P68104 462 aaKnown RBP17.51■□□□□ 0.39
CCM2-216ENST00000488727 TRAM2Q15035 370 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 MRPL2Q5T653 305 aaKnown RBP17.51■□□□□ 0.39
CCM2-216ENST00000488727 C16orf87Q6PH81 154 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 ZBTB46Q86UZ6 589 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 FAM109AQ8N4B1 249 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 FAM26EQ8N5C1 309 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 OR6Q1Q8NGQ2 317 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 GNPDA2Q8TDQ7 276 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 ZHX1-C8orf76Q96EF9 292 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 SLIRPQ9GZT3 109 aaKnown RBP17.51■□□□□ 0.39
CCM2-216ENST00000488727 TBCCD1Q9NVR7 557 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 B4GALT7Q9UBV7 327 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 ICAM5Q9UMF0 924 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 RPL36Q9Y3U8 105 aaKnown RBP17.51■□□□□ 0.39
CCM2-216ENST00000488727 ZNF407Q9C0G0 2248 aa17.51■□□□□ 0.39
CCM2-216ENST00000488727 B8ZZF3 427 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 GTPBP1O00178 669 aaKnown RBP17.5■□□□□ 0.39
CCM2-216ENST00000488727 CYP7B1O75881 506 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CLK1P49759 484 aaKnown RBP17.5■□□□□ 0.39
CCM2-216ENST00000488727 TDGF1P3P51864 188 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 TAS2R41P59536 307 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CDK5Q00535 292 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 ST3GAL3Q11203 375 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 ARMCX4Q5H9R4 360 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 USP43Q70EL4 1123 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CMIPQ8IY22 773 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CLIP4Q8N3C7 705 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 OR4K17Q8NGC6 315 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CPT1CQ8TCG5 803 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CNOT9Q92600 299 aaKnown RBP17.5■□□□□ 0.39
CCM2-216ENST00000488727 SLX1AQ9BQ83 275 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 DEFB127Q9H1M4 99 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 DCSTAMPQ9H295 470 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 DNAJB12Q9NXW2 375 aaKnown RBP17.5■□□□□ 0.39
CCM2-216ENST00000488727 SLC35A3Q9Y2D2 325 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 A3GALT2U3KPV4 340 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 A0A087WUU8 490 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 CDHR4A6H8M9 788 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 NPIPA5E9PKD4 350 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 J3QRK9 145 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 ADAM11O75078 769 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 ADRA2AP08913 450 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 IFNA8P32881 189 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 IDUAP35475 653 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 RGS6P49758 472 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 LARS2Q15031 903 aaKnown RBP17.5■□□□□ 0.39
CCM2-216ENST00000488727 IGFN1Q86VF2 1251 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 TOR1AIP2Q8NFQ8 470 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 ZNF524Q96C55 264 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 IL4I1Q96RQ9 567 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 NPIPA1Q9UND3 350 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 LIPGQ9Y5X9 500 aa17.5■□□□□ 0.39
CCM2-216ENST00000488727 DNAJC13O75165 2243 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 EIF4E2O60573 245 aaKnown RBP17.49■□□□□ 0.39
CCM2-216ENST00000488727 TPST2O60704 377 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 OR5F1O95221 314 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 HPNP05981 417 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 ENDOUP21128 410 aaKnown RBP17.49■□□□□ 0.39
CCM2-216ENST00000488727 MSX1P28360 303 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 PCYT1AP49585 367 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 P2RX1P51575 399 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 EFNB1P98172 346 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 ZNF91Q05481 1191 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 ARSKQ6UWY0 536 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 MFSD4AQ8N468 514 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 TMCO5AQ8N6Q1 288 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 TMEM80Q96HE8 168 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 GPA33Q99795 319 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 LAT2Q9GZY6 243 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 CACYBPQ9HB71 228 aaKnown RBP17.49■□□□□ 0.39
CCM2-216ENST00000488727 FAIMQ9NVQ4 179 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 QPCTLQ9NXS2 382 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 DNAJC27Q9NZQ0 273 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 ZNF232Q9UNY5 417 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 ERGIC3Q9Y282 383 aa17.49■□□□□ 0.39
CCM2-216ENST00000488727 MED12Q93074 2177 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 TRAPPC6AO75865 159 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 DPP4P27487 766 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 GIPRP48546 466 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 SMSP52788 366 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCM2-216ENST00000488727 TSPAN31Q12999 210 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 TMED1Q13445 227 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 GINS1Q14691 196 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 TOMM20Q15388 145 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 EIPR1Q53HC9 387 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 TCEANCQ8N8B7 351 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 FAM83FQ8NEG4 500 aaPredicted RBP17.48■□□□□ 0.39
CCM2-216ENST00000488727 KBTBD8Q8NFY9 601 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 C1GALT1C1Q96EU7 318 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 POLR2J2Q9GZM3 115 aaKnown RBP17.48■□□□□ 0.39
CCM2-216ENST00000488727 PTGES2Q9H7Z7 377 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 HHATLQ9HCP6 504 aa17.48■□□□□ 0.39
CCM2-216ENST00000488727 CCDC59Q9P031 241 aaKnown RBP17.48■□□□□ 0.39
CCM2-216ENST00000488727 LSM2Q9Y333 95 aaKnown RBP17.48■□□□□ 0.39
CCM2-216ENST00000488727 AP3D1O14617 1153 aa17.47■□□□□ 0.39
CCM2-216ENST00000488727 CDC40O60508 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms