RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CCDC184Q52MB2 194 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 ERASQ7Z444 233 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 SLC26A11Q86WA9 606 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 ATP6V0D2Q8N8Y2 350 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 FAM71CQ8NEG0 241 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 OR4K14Q8NGD5 310 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 ATP6V1E2Q96A05 226 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 PINX1Q96BK5 328 aaKnown RBP1.5□□□□□ -2.17
SMC4-219ENST00000487747 NEURL3Q96EH8 262 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 CMTM7Q96FZ5 175 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 PDXPQ96GD0 296 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 ALG12Q9BV10 488 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 ACTR8Q9H981 624 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 MRPS33Q9Y291 106 aaKnown RBP1.5□□□□□ -2.17
SMC4-219ENST00000487747 ALG6Q9Y672 507 aa1.5□□□□□ -2.17
SMC4-219ENST00000487747 GPATCH8Q9UKJ3 1502 aaKnown RBP1.5□□□□□ -2.17
SMC4-219ENST00000487747 PRSS37A4D1T9 235 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 VGLL3A8MV65 326 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 OMGP23515 440 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 TRIP10Q15642 601 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 SLC10A5Q5PT55 438 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 LCN12Q6JVE5 192 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 WDR86Q86TI4 376 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 THOC6Q86W42 341 aaKnown RBP1.49□□□□□ -2.17
SMC4-219ENST00000487747 RIMKLAQ8IXN7 391 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 CD300LFQ8TDQ1 290 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 TMEM186Q96B77 213 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 AKR1E2Q96JD6 320 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 ATP6V0BQ99437 205 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 SLC35A5Q9BS91 424 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 POLR1EQ9GZS1 481 aaKnown RBP1.49□□□□□ -2.17
SMC4-219ENST00000487747 ECT2Q9H8V3 914 aa1.49□□□□□ -2.17
SMC4-219ENST00000487747 NFASCO94856 1347 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 NSG1A0A0A6YYJ2 146 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 IGHV3-66A0A0C4DH42 116 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 C16orf90A8MZG2 172 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 G3V4G9 280 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 SLC31A2O15432 143 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 TOM1L1O75674 476 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 CDRT1O95170 752 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 FGF8P55075 233 aaPredicted RBP1.48□□□□□ -2.17
SMC4-219ENST00000487747 HSD17B7P56937 341 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 STARD6P59095 220 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 OR2G6Q5TZ20 316 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 GALNT17Q6IS24 598 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 CBLN3Q6UW01 205 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 Q6ZN92 141 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 BCORP1Q8N888 145 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 MRPS31Q92665 395 aaKnown RBP1.48□□□□□ -2.17
SMC4-219ENST00000487747 C12orf66Q96MD2 445 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 COL21A1Q96P44 957 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 RPP21Q9H633 154 aaKnown RBP1.48□□□□□ -2.17
SMC4-219ENST00000487747 NUDT15Q9NV35 164 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 ZNF391Q9UJN7 358 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 TNS2Q63HR2 1409 aa1.48□□□□□ -2.17
SMC4-219ENST00000487747 SCN1AP35498 2009 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 SORL1Q92673 2214 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 UBE4BO95155 1302 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 A0A0U1RQV5 110 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 FAM230AA0A1W2PPH8 454 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 C12orf77C9JDV5 145 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 RS1O15537 224 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 LGALS2P05162 132 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 ABOP16442 354 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 PGCP20142 388 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 RFC4P35249 363 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 ESRRGP62508 458 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 PARP15Q460N3 678 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 OR2G3Q8NGZ4 309 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 CHAC1Q9BUX1 264 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 SIGLEC8Q9NYZ4 499 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 ZNF230Q9UIE0 474 aaPredicted RBP1.47□□□□□ -2.17
SMC4-219ENST00000487747 NOL7Q9UMY1 257 aaKnown RBP1.47□□□□□ -2.17
SMC4-219ENST00000487747 S4R3C0 116 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 CARMIL1Q5VZK9 1371 aa1.47□□□□□ -2.17
SMC4-219ENST00000487747 INS-IGF2F8WCM5 200 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 DDX39AO00148 427 aaKnown RBP1.46□□□□□ -2.18
SMC4-219ENST00000487747 CXCL13O43927 109 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 KERAO60938 352 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 CCNKO75909 580 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 HPGDP15428 266 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 CALCRP30988 508 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 FZD2Q14332 565 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 CYTH1Q15438 398 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 NTM-AS1Q6ZSK4 140 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 CENPUQ71F23 418 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 GET4Q7L5D6 327 aaPredicted RBP1.46□□□□□ -2.18
SMC4-219ENST00000487747 NLRP9Q7RTR0 991 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 DPY19L4Q7Z388 723 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 SPC24Q8NBT2 197 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 DENND6BQ8NEG7 585 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 ITCHQ96J02 903 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 VPS35Q96QK1 796 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 GSDMCQ9BYG8 508 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 C12orf10Q9HB07 376 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 CTPS2Q9NRF8 586 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 MTRRQ9UBK8 725 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 B9D1Q9UPM9 204 aa1.46□□□□□ -2.18
SMC4-219ENST00000487747 ZNF207O43670 478 aaKnown RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 BCAS2O75934 225 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms