RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ATAD3AQ9NVI7 634 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 MKLN1Q9UL63 735 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 A4GNTQ9UNA3 340 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 NTNG1Q9Y2I2 539 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 KCNE3Q9Y6H6 103 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CSPG4Q6UVK1 2322 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TRAV17A0A0B4J275 112 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 PINLYPA6NC86 204 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ZNF814B7Z6K7 855 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 G3V3Y1 287 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 IFNL4K9M1U5 179 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 TO15178 435 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 POLR3GO15318 223 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CFLARO15519 480 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 EMC8O43402 210 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 DOK2O60496 412 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CPSF4O95639 269 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 IGKV1D-16P01601 117 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 HMGN2P05204 90 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 IL6P05231 212 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ABCB1P08183 1280 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 IFI6P09912 130 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CCL3P10147 92 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ACP2P11117 423 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 NCF2P19878 526 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CNR1P21554 472 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 S100A3P33764 101 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 GABRA3P34903 492 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CENPAP49450 140 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 POLR2JP52435 117 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CLNS1AP54105 237 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CASP9P55211 416 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 FBXW4P57775 412 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 NANOS3P60323 173 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 RNPS1Q15287 305 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 MED22Q15528 200 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 INPP5JQ15735 1006 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 IGFBP7Q16270 282 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 NTRK2Q16620 822 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 MTX3Q5HYI7 312 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 C6orf163Q5TEZ5 329 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ASPHD1Q5U4P2 390 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ZNF626Q68DY1 528 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 RPUSD3Q6P087 351 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 OPN5Q6U736 354 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 C6orf120Q7Z4R8 191 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ZDHHC23Q8IYP9 409 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CYP4Z2PQ8N1L4 340 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 C17orf47Q8NEP4 570 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 OR10G3Q8NGC4 313 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 OR5AK3PQ8NH89 298 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 GOT1L1Q8NHS2 421 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 HGDQ93099 445 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 TMBIM1Q969X1 311 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 VPS33AQ96AX1 596 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 INTS12Q96CB8 462 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 NTNG2Q96CW9 530 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 RNF183Q96D59 192 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 MSI2Q96DH6 328 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 OTUB1Q96FW1 271 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 RILPQ96NA2 401 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 BTBD9Q96Q07 612 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 OR52E6Q96RD3 313 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 LMF2Q9BU23 707 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 C3orf14Q9HBI5 128 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 EQTNQ9NQ60 294 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 SLC6A13Q9NSD5 602 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ZCCHC3Q9NUD5 404 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 DDX18Q9NVP1 670 aaKnown RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ASF1BQ9NVP2 202 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 HPF1Q9NWY4 346 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 TAS2R9Q9NYW1 312 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CCDC167Q9P0B6 97 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ABI3Q9P2A4 366 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 PRODH2Q9UF12 536 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 BTNL2Q9UIR0 455 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 ANAPC2Q9UJX6 822 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CFL2Q9Y281 166 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 FAM96BQ9Y3D0 163 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 SNX8Q9Y5X2 465 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CHCHD2Q9Y6H1 151 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 CAPN7Q9Y6W3 813 aa5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 RP1L1Q8IWN7 2480 aaPredicted RBP5.59□□□□□ -1.51
RTFDC1-209ENST00000487211 A0A0G2JMM0 328 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 A0A1W2PPB8 328 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 A0A1W2PRS3 328 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 GMNCA6NCL1 334 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 ASPDHA6ND91 283 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 FRG2CA6NGY1 282 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 KIR3DP1A8MWS1 328 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 EBAG9O00559 213 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 AP3D1O14617 1153 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 NME2P1O60361 137 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 TSPAN2O60636 221 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 UGT2B11O75310 529 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 PTP4A3O75365 173 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 REM1O75628 298 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 SLC25A12O75746 678 aa5.58□□□□□ -1.52
RTFDC1-209ENST00000487211 NKX2-2O95096 273 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms