RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 MT-ND1P03886 318 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 YES1P07947 543 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 AGTR1P30556 359 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 P2RY4P51582 365 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 TMEM225Q6GV28 225 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 BTLAQ7Z6A9 289 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 ADGRG5Q8IZF4 528 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF417Q8TAU3 575 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF587Q96SQ5 575 aaPredicted RBP21.05■□□□□ 0.96
ABCF3-216ENST00000485921 TACO1Q9BSH4 297 aaKnown RBP21.05■□□□□ 0.96
ABCF3-216ENST00000485921 ANKRD19PQ9H560 264 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 BCO1Q9HAY6 547 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 KCNJ16Q9NPI9 418 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 SEC14L4Q9UDX3 406 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 TESMINQ9Y4I5 508 aa21.05■□□□□ 0.96
ABCF3-216ENST00000485921 INTS1Q8N201 2190 aaKnown RBP21.04■□□□□ 0.96
ABCF3-216ENST00000485921 A0A1W2PRQ8 180 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 DHRS12A0PJE2 317 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 NKX2-6A6NCS4 301 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF716A6NP11 495 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF724A8MTY0 619 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 MT-ATP6P00846 226 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 UMPSP11172 480 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 MAGEA2P43356 314 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 SLC16A1P53985 500 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 SPIBQ01892 262 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 DGCR6Q14129 220 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF74Q16587 644 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 H1FNTQ75WM6 255 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-216ENST00000485921 MAMDC2Q7Z304 686 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-216ENST00000485921 OR6K3Q8NGY3 331 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 CANT1Q8WVQ1 401 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 ACOT11Q8WXI4 607 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF775Q96BV0 537 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-216ENST00000485921 DHRS1Q96LJ7 313 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 ASPNQ9BXN1 380 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 PIGMQ9H3S5 423 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 CHST11Q9NPF2 352 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 AURKCQ9UQB9 309 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 B3GALT5Q9Y2C3 310 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 CORINQ9Y5Q5 1042 aa21.04■□□□□ 0.96
ABCF3-216ENST00000485921 SPTBN1Q01082 2364 aaKnown RBP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 IGKV3D-15A0A087WSY6 115 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 TCRBV3S1A0A5B6 114 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 ENO4A6NNW6 628 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 EEF1E1-BLOC1S5C9J1V9 151 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 EEF1E1O43324 174 aaKnown RBP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 PIP5K1CO60331 668 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 CIB2O75838 187 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 IGF2P01344 180 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 RAP2AP10114 183 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 ERFP50548 548 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 SMIM11AP58511 58 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 LSM11P83369 360 aaKnown RBP eCLIP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 FGD3Q5JSP0 725 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 C1orf146Q5VVC0 180 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 TBPL2Q6SJ96 375 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 ZNF730Q6ZMV8 503 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 YTHDF3Q7Z739 585 aaKnown RBP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 GPAT4Q86UL3 456 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 SCAIQ8N9R8 606 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 OR52J3Q8NH60 311 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 UTP4Q969X6 686 aaKnown RBP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 SGTBQ96EQ0 304 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 SF3B5Q9BWJ5 86 aaKnown RBP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 FKRPQ9H9S5 495 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 NANSQ9NR45 359 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 C20orf141Q9NUB4 165 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 MRPL39Q9NYK5 338 aaKnown RBP21.03■□□□□ 0.96
ABCF3-216ENST00000485921 EMC3Q9P0I2 261 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 PROCRQ9UNN8 238 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 RASD1Q9Y272 281 aa21.03■□□□□ 0.96
ABCF3-216ENST00000485921 A0A087WUU8 490 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 SMNDC1O75940 238 aaKnown RBP eCLIP21.02■□□□□ 0.96
ABCF3-216ENST00000485921 VAMP5O95183 116 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 GADD45GO95257 159 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 CGAP01215 116 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 RRM2P31350 389 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 PMS2P3Q13401 168 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 SLC17A1Q14916 467 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 PODNL1Q6PEZ8 512 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 RRM2BQ7LG56 351 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 NUFIP2Q7Z417 695 aaKnown RBP21.02■□□□□ 0.96
ABCF3-216ENST00000485921 NRMQ8IXM6 262 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 RNF113BQ8IZP6 322 aaKnown RBP21.02■□□□□ 0.96
ABCF3-216ENST00000485921 LRRC17Q8N6Y2 441 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 SLC7A13Q8TCU3 470 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 CHID1Q9BWS9 393 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 C12orf49Q9H741 205 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 PLSCR4Q9NRQ2 329 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 JKAMPQ9P055 326 aa21.02■□□□□ 0.96
ABCF3-216ENST00000485921 TRBV4-1A0A0J9YWV2 114 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 A1L4Q6 167 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 GPR171O14626 319 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 OR7A10O76100 309 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 CLDN1O95832 211 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 CD8BP10966 210 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 IFI30P13284 250 aa21.01■□□□□ 0.95
ABCF3-216ENST00000485921 NQO1P15559 274 aaKnown RBP21.01■□□□□ 0.95
ABCF3-216ENST00000485921 MBOAT2Q6ZWT7 520 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms