RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OR9K2Q8NGE7 335 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 OR4A15Q8NGL6 344 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 HPS1Q92902 700 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 MAELQ96JY0 434 aaKnown RBP11.33□□□□□ -0.6
HDAC6-227ENST00000485102 SLC38A2Q96QD8 506 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 ZBTB18Q99592 522 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 C20orf27Q9GZN8 174 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 SLC38A1Q9H2H9 487 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 MTHFD2LQ9H903 347 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-227ENST00000485102 CHODLQ9H9P2 273 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 PNPOQ9NVS9 261 aa11.33□□□□□ -0.6
HDAC6-227ENST00000485102 ZC3H12DA2A288 527 aaKnown RBP11.32□□□□□ -0.6
HDAC6-227ENST00000485102 LIPT2A6NK58 231 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 AQP7P3A6NL99 342 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 IGLV1-44P01699 117 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 GPIP06744 558 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 UQCRBP14927 111 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 KHKP50053 298 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-227ENST00000485102 EPS8Q12929 822 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 CR1LQ2VPA4 569 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 TBRG1Q3YBR2 411 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 HIKESHIQ53FT3 197 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-227ENST00000485102 NXNQ6DKJ4 435 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 EPGNQ6UW88 154 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 AAED1Q7RTV5 226 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 CPLX4Q7Z7G2 160 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 ZNF440Q8IYI8 595 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 TMEM99Q8N816 258 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 NUP37Q8NFH4 326 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 OR4F15Q8NGB8 312 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 OR1K1Q8NGR3 316 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 BCL2L2Q92843 193 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-227ENST00000485102 DNAJA3Q96EY1 480 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 C1orf159Q96HA4 380 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 ZNF385AQ96PM9 386 aaKnown RBP11.32□□□□□ -0.6
HDAC6-227ENST00000485102 DPY30Q9C005 99 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 RAB1BQ9H0U4 201 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 ZNF442Q9H7R0 627 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 AKTIPQ9H8T0 292 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 TCF7L2Q9NQB0 619 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 KLHL14Q9P2G3 628 aa11.32□□□□□ -0.6
HDAC6-227ENST00000485102 MARCOQ9UEW3 520 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-227ENST00000485102 GMNCA6NCL1 334 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 CFAP73A6NFT4 308 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 AP3D1O14617 1153 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 UBDO15205 165 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 STAMBPO95630 424 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 CPSF4O95639 269 aaKnown RBP11.31□□□□□ -0.6
HDAC6-227ENST00000485102 IGKV3-15P01624 115 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 OR4A8P0C604 315 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 CCNA2P20248 432 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 P2RY4P51582 365 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 AQP5P55064 265 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 HPCAP84074 193 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 NAAAQ02083 359 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 CEACAM7Q14002 265 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 GNA13Q14344 377 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 IQCCQ4KMZ1 466 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 GPAT3Q53EU6 434 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 UGT2A3Q6UWM9 527 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 SLC46A3Q7Z3Q1 461 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 ANKRD46Q86W74 232 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 NEU4Q8WWR8 484 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-227ENST00000485102 AURKBQ96GD4 344 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-227ENST00000485102 CCDC115Q96NT0 180 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 DOK1Q99704 481 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 VRK1Q99986 396 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-227ENST00000485102 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 LINC00470Q9BZP3 86 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 SLCO1B3Q9NPD5 702 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 FAM53CQ9NYF3 392 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 BTNL2Q9UIR0 455 aa11.31□□□□□ -0.6
HDAC6-227ENST00000485102 VSTM5A8MXK1 200 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 ZNF587BE7ETH6 402 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 RPL36A-HNRNPH2H7BZ11 118 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 SDHDO14521 159 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 TCF21O43680 179 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 LILRA1O75019 489 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 AKR7A3O95154 331 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 DBIP07108 87 aaKnown RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 CHRM4P08173 479 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 IL7RP16871 459 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 LSP1P33241 339 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 MRPL19P49406 292 aaKnown RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 ANXA11P50995 505 aaKnown RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 ATP4BP51164 291 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 ARFIP2P53365 341 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 SRSF2Q01130 221 aaKnown RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 SYPL1Q16563 259 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 MRPL2Q5T653 305 aaKnown RBP11.3□□□□□ -0.6
HDAC6-227ENST00000485102 TMEM225Q6GV28 225 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 CREB3L2Q70SY1 520 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 MEX3DQ86XN8 651 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms