RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ARHGDIGQ99819 225 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 ECSITQ9BQ95 431 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 TMEM27Q9HBJ8 222 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 NPAP1Q9NZP6 1156 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 SELENONQ9NZV5 590 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 MALT1Q9UDY8 824 aa10.82□□□□□ -0.68
MSH5-216ENST00000484309 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 BBIP1A8MTZ0 92 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 M0R082 166 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 CNOT4O95628 575 aaKnown RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 LGI1O95970 557 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 CD3EP07766 207 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 CDH2P19022 906 aaPredicted RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 CD247P20963 164 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 GRPRP30550 384 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 SELENOPP49908 381 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 CRYBA2P53672 197 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 CDH12P55289 794 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 IL1RL1Q01638 556 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 NRF1Q16656 503 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 COQ5Q5HYK3 327 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 ADAM5Q6NVV9 412 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 NIPAL3Q6P499 406 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 PATL1Q86TB9 770 aaKnown RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 CALHM3Q86XJ0 350 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 TGIF2LYQ8IUE0 185 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 EPHX4Q8IUS5 362 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 SLC30A8Q8IWU4 369 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 WFDC11Q8NEX6 87 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 KBTBD8Q8NFY9 601 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 OR8J3Q8NGG0 315 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 OR6T1Q8NGN1 323 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 ZNF417Q8TAU3 575 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 DNAJA4Q8WW22 397 aaPredicted RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 AKAP1Q92667 903 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSH5-216ENST00000484309 SLC38A4Q969I6 547 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 TMEM45BQ96B21 275 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 MUCL1Q96DR8 90 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 SLC47A1Q96FL8 570 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 ZNF587Q96SQ5 575 aaPredicted RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 SF3B5Q9BWJ5 86 aaKnown RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 C1QTNF6Q9BXI9 259 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 FAM107BQ9H098 131 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 SLCO5A1Q9H2Y9 848 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 ESRP2Q9H6T0 727 aaKnown RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 C12orf10Q9HB07 376 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 NGBQ9NPG2 151 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 BEX4Q9NWD9 120 aaPredicted RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 PARPBPQ9NWS1 579 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 TAS2R16Q9NYV7 291 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
MSH5-216ENST00000484309 PRDM4Q9UKN5 801 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 RNF115Q9Y4L5 304 aa10.81□□□□□ -0.68
MSH5-216ENST00000484309 TRAV36DV7A0A075B6V5 113 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 OR5H1A6NKK0 313 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 LRRN3E7EW58 273 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 PDLIM1O00151 329 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 SMPD2O60906 423 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 TNFRSF1BP20333 461 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ZNF83P51522 516 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 SEC24CP53992 1094 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 CLDN17P56750 224 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ADAM8P78325 824 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 FOXD4Q12950 439 aaPredicted RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 GABRA6Q16445 453 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ENTPD8Q5MY95 495 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 TIMM23BQ5SRD1 257 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 FAM69AQ5T7M9 428 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 INTS11Q5TA45 600 aaKnown RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 FAM91A1Q658Y4 838 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 C20orf204Q6ZNR8 217 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 CREB3L2Q70SY1 520 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 TSPYL5Q86VY4 417 aaPredicted RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 C10orf53Q8N6V4 93 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 PCYOX1LQ8NBM8 494 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 LILRB1Q8NHL6 650 aaPredicted RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 PERPQ96FX8 193 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ZNF583Q96ND8 569 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ALKBH3Q96Q83 286 aaPredicted RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 SH3GL1Q99961 368 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ELAC2Q9BQ52 826 aaKnown RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 TMEM204Q9BSN7 226 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 MRGBPQ9NV56 204 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 RASD1Q9Y272 281 aa10.8□□□□□ -0.68
MSH5-216ENST00000484309 ZNF469Q96JG9 3925 aaPredicted RBP10.8□□□□□ -0.68
MSH5-216ENST00000484309 MTORP42345 2549 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 A0A087WUJ7 227 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 KPNA4O00629 521 aaPredicted RBP10.79□□□□□ -0.68
MSH5-216ENST00000484309 HS3ST1O14792 307 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 AIM2O14862 343 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 OR2T1O43869 369 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 SHOX2O60902 331 aaPredicted RBP10.79□□□□□ -0.68
MSH5-216ENST00000484309 KRT33AO76009 404 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 VAMP5O95183 116 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 HPRP00739 348 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 BGLAPP02818 100 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 THY1P04216 161 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 COX4I1P13073 169 aa10.79□□□□□ -0.68
MSH5-216ENST00000484309 CD99P14209 185 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms