RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 KATNB1Q9BVA0 655 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 WDR54Q9H977 334 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ADGRL4Q9HBW9 690 aa8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 ZNF346Q9UL40 294 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-204ENST00000483763 CNTRLQ7Z7A1 2325 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 C12orf71A8MTZ7 269 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 FAM25EA8MYX2 175 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 EIF4E2O60573 245 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 B3GALNT1O75752 331 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SERPINI2O75830 405 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF3P17036 446 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 HK1P19367 917 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SPINK2P20155 84 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 UGT2B10P36537 528 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SERPINB10P48595 397 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 P2RX1P51575 399 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPS7P62081 194 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 DGUOKQ16854 277 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 VASNQ6EMK4 673 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ARSKQ6UWY0 536 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 DPY19L2P2Q6ZN68 376 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 FAM122BQ7Z309 247 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SNX29P2Q8IUI4 249 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 GID4Q8IVV7 300 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR10G3Q8NGC4 313 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SPRYD4Q8WW59 207 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 LIPHQ8WWY8 451 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 Q96M85 177 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 TSSK2Q96PF2 358 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 CMKLR1Q99788 373 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 PTDSS2Q9BVG9 487 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR11A1Q9GZK7 315 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 CCDC86Q9H6F5 360 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 EXOSC4Q9NPD3 245 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 HIF3AQ9Y2N7 669 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 PTRH2Q9Y3E5 179 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 HS3ST3B1Q9Y662 390 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SIRT4Q9Y6E7 314 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 CACNA1AO00555 2505 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 DSPP15924 2871 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 LOC102723996A0A087X1L8 192 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 DVL2O14641 736 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 MAGEB4O15481 346 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 CBFA2T3O75081 653 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 DKK1O94907 266 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SBK2P0C263 348 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 PAICSP22234 425 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 PSMA1P25786 263 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 CDKN2AP42771 156 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ID4P47928 161 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SLC6A8P48029 635 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPS25P62851 125 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPL18Q07020 188 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 CBFBQ13951 182 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 TOMM20Q15388 145 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 BTBD16Q32M84 506 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF829Q3KNS6 432 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ARHGAP11AQ6P4F7 1023 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF322Q6U7Q0 402 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 USP43Q70EL4 1123 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 SSX6Q7RTT6 188 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR10H4Q8NGA5 316 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 OR6Q1Q8NGQ2 317 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 FNDC8Q8TC99 324 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ELP5Q8TE02 316 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZMYND19Q96E35 227 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 LRFN5Q96NI6 719 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 DACH2Q96NX9 599 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 FAIMQ9NVQ4 179 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 ASB6Q9NWX5 421 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 MED11Q9P086 117 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 BAIAP2Q9UQB8 552 aa8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 EXOSC1Q9Y3B2 195 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-204ENST00000483763 NBEAQ8NFP9 2946 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 IGHV1-45A0A0A0MS14 117 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 TEX13CA0A0J9YWL9 993 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 A0A1W2PQL4 384 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 MED19A0JLT2 244 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMEM72A0PK05 275 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 IRGMA1A4Y4 181 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 METTL15A6NJ78 407 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 FAM171A2A8MVW0 826 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 SHISA8B8ZZ34 492 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 E9PI62 339 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 DCTN6O00399 190 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 ARPC3O15145 178 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 NPIPB7O75200 414 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZFAND5O76080 213 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 TFP02787 698 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 BMP4P12644 408 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 CXCR1P25024 350 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 UQCRC1P31930 480 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 CCKBRP32239 447 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 PTGDSP41222 190 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPS18P62269 152 aaKnown RBP8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 CTAG1AP78358 180 aa8.01□□□□□ -1.13
CDC42SE1-204ENST00000483763 INSM1Q01101 510 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms