RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 NYAP2Q9P242 653 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC7A8Q9UHI5 535 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF221Q9UK13 617 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 PRPF19Q9UMS4 504 aaKnown RBP2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP6V1DQ9Y5K8 247 aa2.28□□□□□ -2.04
LAPTM4A-202ENST00000483117 IGHV3-20A0A0C4DH32 117 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TRBV7-9A0A0J9YWB2 115 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 OR6C65A6NJZ3 312 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 FAM74A7A6NL05 159 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CCT8L1PA6NM43 557 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TMCO5BA8MYB1 307 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 H3BMH7 237 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 SIRPB1O00241 398 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 DYNC1I1O14576 645 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 AIM2O14862 343 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CASKO14936 926 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 B4GAT1O43505 415 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 OR10H3O60404 316 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 KLHL2O95198 593 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 RPLP0P05388 317 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 SERPINE2P07093 398 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 ADORA3P0DMS8 318 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 RNH1P13489 461 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 MYOGP15173 224 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 KITLGP21583 273 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 GNA11P29992 359 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PPP2R1BP30154 601 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 GPR183P32249 361 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 S100A5P33763 92 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 DRD3P35462 400 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PCK1P35558 622 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 NPBWR2P48146 333 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CX3CR1P49238 355 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 STK19P49842 368 aaPredicted RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PRELPP51888 382 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 ARHGDIAP52565 204 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PLTPP55058 493 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CSNK1G2P78368 415 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 LRRC63Q05C16 580 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 RGS1Q08116 209 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 RAB40BQ12829 278 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CAPRIN1Q14444 709 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CYTH1Q15438 398 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CHI3L2Q15782 390 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PSG3Q16557 428 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PTPN20Q4JDL3 420 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 FAM74A3Q4VXF1 159 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TCHHL1Q5QJ38 904 aaPredicted RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 C1orf220Q5T0J3 134 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 GPR157Q5UAW9 335 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TTC23LQ6PF05 361 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CERS6Q6ZMG9 384 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 FRA10AC1Q70Z53 315 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 BHLHA15Q7RTS1 189 aaPredicted RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 SLC16A14Q7RTX9 510 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 MRPL21Q7Z2W9 205 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 HDDC2Q7Z4H3 204 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TSEN54Q7Z6J9 526 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CATSPER3Q86XQ3 398 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 APRG1Q8IVJ8 170 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 C12orf56Q8IXR9 622 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 JAGN1Q8N5M9 183 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 OR5M9Q8NGP3 310 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 SPPL2AQ8TCT8 520 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 SSC4DQ8WTU2 575 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 MRPS31Q92665 395 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TNFRSF14Q92956 283 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 NAT6Q93015 286 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 C18orf25Q96B23 403 aaPredicted RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 LRRC45Q96CN5 670 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CXorf40BQ96DE9 158 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CSPG4P5Q96PW8 444 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 MBOAT4Q96T53 435 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CNN2Q99439 309 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 MAPKAP1Q9BPZ7 522 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 UQCC2Q9BRT2 126 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CCDC94Q9BW85 323 aaPredicted RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 GPR174Q9BXC1 333 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 ROGDIQ9GZN7 287 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 NSRP1Q9H0G5 558 aaKnown RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 RACGAP1Q9H0H5 632 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 RAB1BQ9H0U4 201 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CXXC4Q9H2H0 198 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 FNDC4Q9H6D8 234 aaPredicted RBP2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 NMRAL1Q9HBL8 299 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 TMEM165Q9HC07 324 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 SLC25A19Q9HC21 320 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 ZC4H2Q9NQZ6 224 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 IL36GQ9NZH8 169 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 KLK11Q9UBX7 282 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 PHF11Q9UIL8 331 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 MEMO1Q9Y316 297 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 CBY1Q9Y3M2 126 aa2.27□□□□□ -2.05
LAPTM4A-202ENST00000483117 AQRO60306 1485 aaKnown RBP eCLIP2.26□□□□□ -2.052e-7■■□□□ 13.4
LAPTM4A-202ENST00000483117 GOLGA8QA0A0J9YX86 632 aa2.26□□□□□ -2.05
LAPTM4A-202ENST00000483117 TMEM120BA0PK00 339 aa2.26□□□□□ -2.05
LAPTM4A-202ENST00000483117 RAB19A4D1S5 217 aa2.26□□□□□ -2.05
LAPTM4A-202ENST00000483117 LRRIQ3A6PVS8 624 aaPredicted RBP2.26□□□□□ -2.05
LAPTM4A-202ENST00000483117 A8MXQ7 604 aa2.26□□□□□ -2.05
LAPTM4A-202ENST00000483117 G3V4G9 280 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms