RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CRIM1Q9NZV1 1036 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 NDRG3Q9UGV2 375 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 B3GALT5Q9Y2C3 310 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 CORINQ9Y5Q5 1042 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 HCFC1P51610 2035 aa18.56■□□□□ 0.56
SEC13-217ENST00000482647 DCHS2Q6V1P9 2916 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 FZD7O75084 574 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 GRPRP30550 384 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 SSTR2P30874 369 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 P2RY4P51582 365 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 H1FNTQ75WM6 255 aaPredicted RBP18.55■□□□□ 0.56
SEC13-217ENST00000482647 ZNF295-AS1Q8N0V1 137 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 OR9K2Q8NGE7 335 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 APH1AQ96BI3 265 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 ZNF426Q9BUY5 554 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 ASPNQ9BXN1 380 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 KLHL4Q9C0H6 718 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 SNX13Q9Y5W8 968 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 FLVCR1Q9Y5Y0 555 aa18.55■□□□□ 0.56
SEC13-217ENST00000482647 ANKHD1Q8IWZ3 2542 aaKnown RBP18.54■□□□□ 0.56
SEC13-217ENST00000482647 CNOT4O95628 575 aaKnown RBP18.54■□□□□ 0.56
SEC13-217ENST00000482647 MT-ATP6P00846 226 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 BGLAPP02818 100 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 RBM34P42696 430 aaKnown RBP18.54■□□□□ 0.56
SEC13-217ENST00000482647 ST3GAL3Q11203 375 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 SCAIQ8N9R8 606 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 LINC01560Q8TB33 94 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 C14orf79Q96F83 325 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 PRRC1Q96M27 445 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 NSMCE2Q96MF7 247 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 DACH2Q96NX9 599 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 PRSS27Q9BQR3 290 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 HDHD5Q9BXW7 423 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 TAS2R1Q9NYW7 299 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 PRPF19Q9UMS4 504 aaKnown RBP18.54■□□□□ 0.56
SEC13-217ENST00000482647 A4GNTQ9UNA3 340 aa18.54■□□□□ 0.56
SEC13-217ENST00000482647 M0R082 166 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 ARPC2O15144 300 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 UBOX5O94941 541 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 EPXP11678 715 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 NQO1P15559 274 aaKnown RBP18.53■□□□□ 0.56
SEC13-217ENST00000482647 PTNP21246 168 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 CBLP22681 906 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 YAP1P46937 504 aaKnown RBP18.53■□□□□ 0.56
SEC13-217ENST00000482647 LTBQ06643 244 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 P2RY6Q15077 328 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 CYP4Z1Q86W10 505 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 NKAIN4Q8IVV8 208 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 GABRG1Q8N1C3 465 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 ZIC4Q8N9L1 334 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 ZNF417Q8TAU3 575 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 TMEM45BQ96B21 275 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 HS6ST2Q96MM7 605 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 ZNF587Q96SQ5 575 aaPredicted RBP18.53■□□□□ 0.56
SEC13-217ENST00000482647 FNDC11Q9BVV2 318 aa18.53■□□□□ 0.56
SEC13-217ENST00000482647 SH3D21A4FU49 640 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 KPNA4O00629 521 aaPredicted RBP18.52■□□□□ 0.56
SEC13-217ENST00000482647 ADAP00813 363 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 PRF1P14222 555 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 NTF4P34130 210 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 FOXD4Q12950 439 aaPredicted RBP18.52■□□□□ 0.56
SEC13-217ENST00000482647 PMS2P3Q13401 168 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 C1DQ13901 141 aaKnown RBP18.52■□□□□ 0.56
SEC13-217ENST00000482647 POU4F3Q15319 338 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 FBXW9Q5XUX1 488 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 CASP12Q6UXS9 341 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 STAC2Q6ZMT1 411 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 Q6ZT83 130 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 CREB3L2Q70SY1 520 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.52■□□□□ 0.56
SEC13-217ENST00000482647 UBE2J2Q8N2K1 259 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 ADPRHL1Q8NDY3 354 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 TMEM239Q8WW34 195 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 PYURFQ96I23 114 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 OXGR1Q96P68 337 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 MOGAT1Q96PD6 335 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 MRPL39Q9NYK5 338 aaKnown RBP18.52■□□□□ 0.56
SEC13-217ENST00000482647 SEC14L4Q9UDX3 406 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 PRSS50Q9UI38 385 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 GPR52Q9Y2T5 361 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 FAM32AQ9Y421 112 aaKnown RBP18.52■□□□□ 0.56
SEC13-217ENST00000482647 ENPP4Q9Y6X5 453 aa18.52■□□□□ 0.56
SEC13-217ENST00000482647 LOC102725191A0A1B0GVB3 256 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 CASKO14936 926 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 CH25HO95992 272 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 MT-ND1P03886 318 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 PPP3CBP16298 524 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 ZNF43P17038 809 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 PSMB1P20618 241 aaKnown RBP18.51■□□□□ 0.55
SEC13-217ENST00000482647 EDNRAP25101 427 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 ZNF74Q16587 644 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 AAED1Q7RTV5 226 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 CXorf67Q86X51 503 aaPredicted RBP18.51■□□□□ 0.55
SEC13-217ENST00000482647 OFCC1Q8IZS5 231 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 KDM8Q8N371 416 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 TMEM255BQ8WV15 326 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 ZNF385AQ96PM9 386 aaKnown RBP18.51■□□□□ 0.55
SEC13-217ENST00000482647 MED18Q9BUE0 208 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 FKRPQ9H9S5 495 aa18.51■□□□□ 0.55
SEC13-217ENST00000482647 NANSQ9NR45 359 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms