RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 WDFY2Q96P53 400 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 IL4I1Q96RQ9 567 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SDF2Q99470 211 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 MCHR1Q99705 422 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 NRTNQ99748 197 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 CCDC32Q9BV29 185 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 FN3KQ9H479 309 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 SP140LQ9H930 580 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 AMBNQ9NP70 447 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 CD93Q9NPY3 652 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 INPP5EQ9NRR6 644 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 NDUFB11Q9NX14 153 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 WSB2Q9NYS7 404 aaPredicted RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 TVP23BQ9NYZ1 205 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 POMT2Q9UKY4 750 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 PADI1Q9ULC6 663 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 STUB1Q9UNE7 303 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 HEMK1Q9Y5R4 338 aaPredicted RBP7.07□□□□□ -1.28
SNX13-208ENST00000482558 CDH10Q9Y6N8 788 aa7.07□□□□□ -1.28
SNX13-208ENST00000482558 MN1Q10571 1320 aaPredicted RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 PLXND1Q9Y4D7 1925 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 MDC1Q14676 2089 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 TEX13CA0A0J9YWL9 993 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 LILRA5A6NI73 299 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 CYR61O00622 381 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 KIAA0513O60268 411 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 CTNSO60931 367 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 NKX2-2O95096 273 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 EPPINO95925 133 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 IL18BPO95998 194 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 IL1AP01583 271 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 HSMCR30P0CW71 290 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 RNH1P13489 461 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 NT5EP21589 574 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 TCEA1P23193 301 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 CFL1P23528 166 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 MAP3K8P41279 467 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 RBM34P42696 430 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 OMPP47874 163 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 FASLGP48023 281 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 MTNR1AP48039 350 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 RORCP51449 518 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 PDX1P52945 283 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 WNT4P56705 351 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 EEF1A1P68104 462 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 BNC1Q01954 994 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 BDH1Q02338 343 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 HHEXQ03014 270 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 ACSM1Q08AH1 577 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 GPR50Q13585 617 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 OXA1LQ15070 435 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 HFEQ30201 348 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 LEXMQ3ZCV2 418 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 DCST2Q5T1A1 773 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 NXNL2Q5VZ03 156 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 TMEM236Q5W0B7 351 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 SLC25A24Q6NUK1 477 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 ZNF550Q7Z398 422 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 ZNF440Q8IYI8 595 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 CA13Q8N1Q1 262 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 SLC16A11Q8NCK7 471 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 PSD4Q8NDX1 1056 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 CADM4Q8NFZ8 388 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 OR6C4Q8NGE1 309 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 SLC37A2Q8TED4 501 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 AP3S1Q92572 193 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 KAT2AQ92830 837 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 CDS1Q92903 461 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 UCN3Q969E3 161 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 ABTB1Q969K4 478 aaPredicted RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 CTHRC1Q96CG8 243 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 LRR1Q96L50 414 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 ZNF582Q96NG8 517 aaPredicted RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 GAL3ST4Q96RP7 486 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 MACROD1Q9BQ69 325 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 MESP1Q9BRJ9 268 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 RHNO1Q9BSD3 238 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 LMF2Q9BU23 707 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 MED18Q9BUE0 208 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 TRIM2Q9C040 744 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 RAB33BQ9H082 229 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 NUAK2Q9H093 628 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 TMEM27Q9HBJ8 222 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 CPNE5Q9HCH3 593 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 EQTNQ9NQ60 294 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 JKAMPQ9P055 326 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 DNAJB11Q9UBS4 358 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 GSTK1Q9Y2Q3 226 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 KCNK7Q9Y2U2 307 aa7.06□□□□□ -1.28
SNX13-208ENST00000482558 LSM2Q9Y333 95 aaKnown RBP7.06□□□□□ -1.28
SNX13-208ENST00000482558 LOC100506127A0A0U1RQW1 187 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 CDHR4A6H8M9 788 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 C2CD4DB7Z1M9 353 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 ZNF670-ZNF695F2Z2N8 137 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 TMX2-CTNND1H3BSU7 103 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 SLC33A1O00400 549 aaPredicted RBP7.05□□□□□ -1.28
SNX13-208ENST00000482558 SLC30A4O14863 429 aa7.05□□□□□ -1.28
SNX13-208ENST00000482558 P2RX6O15547 441 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 662.8 ms