RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 M0R082 166 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 OR2T1O43869 369 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 FZD7O75084 574 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 LYPD3O95274 346 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 CNOT4O95628 575 aaKnown RBP13.77□□□□□ -0.21
HMGA1-206ENST00000478214 IFNA14P01570 189 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 COX5AP20674 150 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 CBLP22681 906 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 IGHV1-2P23083 117 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 GTF2E2P29084 291 aaKnown RBP13.77□□□□□ -0.21
HMGA1-206ENST00000478214 GRPRP30550 384 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 DNAJA1P31689 397 aaKnown RBP13.77□□□□□ -0.21
HMGA1-206ENST00000478214 GSK3BP49841 420 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 PSME3P61289 254 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 CYBRD1Q53TN4 286 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
HMGA1-206ENST00000478214 FBXW9Q5XUX1 488 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 ALKBH2Q6NS38 261 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 BHLHA15Q7RTS1 189 aaPredicted RBP13.77□□□□□ -0.21
HMGA1-206ENST00000478214 CARM1Q86X55 608 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 WFDC8Q8IUA0 241 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 KDM8Q8N371 416 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 ADAMTS16Q8TE57 1224 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 PIK3IP1Q96FE7 263 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 ZNF587Q96SQ5 575 aaPredicted RBP13.77□□□□□ -0.21
HMGA1-206ENST00000478214 PCDHAC1Q9H158 963 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 PLEKHF2Q9H8W4 249 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 PARPBPQ9NWS1 579 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 ITGB1BP2Q9UKP3 347 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 RASD1Q9Y272 281 aa13.77□□□□□ -0.21
HMGA1-206ENST00000478214 TRAPPC13A5PLN9 417 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 KLF4O43474 513 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 CHP2O43745 196 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 SHOX2O60902 331 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-206ENST00000478214 VAMP5O95183 116 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 LOXP28300 417 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-206ENST00000478214 OR1E2P47887 323 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-206ENST00000478214 LTBQ06643 244 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 FAPQ12884 760 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 TAB1Q15750 504 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 TSPO2Q5TGU0 170 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 LINC00114Q6XXX2 140 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 WDR88Q6ZMY6 472 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 CREB3L2Q70SY1 520 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 AAED1Q7RTV5 226 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 EPHX4Q8IUS5 362 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 ZNF433Q8N7K0 673 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-206ENST00000478214 TMEM45BQ96B21 275 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 HS3ST6Q96QI5 342 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 EPYCQ99645 322 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 TMEM43Q9BTV4 400 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 ALG2Q9H553 416 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 SLC7A10Q9NS82 523 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 MALT1Q9UDY8 824 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 SLC7A7Q9UM01 511 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 PRR14LQ5THK1 2151 aa13.76□□□□□ -0.21
HMGA1-206ENST00000478214 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-206ENST00000478214 LRRN3E7EW58 273 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 CXCR6O00574 342 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 BGLAPP02818 100 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 BEX5Q5H9J7 111 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 DEF8Q6ZN54 512 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 OR6S1Q8NH40 331 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 TPD52L3Q96J77 140 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 MOGAT1Q96PD6 335 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 LRRC37BQ96QE4 947 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 CCT8L2Q96SF2 557 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 ASB6Q9NWX5 421 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 B3GAT1Q9P2W7 334 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 ABCD2Q9UBJ2 740 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 PLEKHA6Q9Y2H5 1048 aa13.75□□□□□ -0.21
HMGA1-206ENST00000478214 GSTA4O15217 222 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 SELENOPP49908 381 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 SELENOWP63302 87 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 STK11Q15831 433 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 H1FNTQ75WM6 255 aaPredicted RBP13.74□□□□□ -0.21
HMGA1-206ENST00000478214 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 HSD17B8Q92506 261 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 SLC41A3Q96GZ6 507 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 PRSS27Q9BQR3 290 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 TAS2R16Q9NYV7 291 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 UPB1Q9UBR1 384 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 ST6GALNAC2Q9UJ37 374 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 B3GALT5Q9Y2C3 310 aa13.74□□□□□ -0.21
HMGA1-206ENST00000478214 CIB4A0PJX0 185 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 PDLIM1O00151 329 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 NDUFAB1O14561 156 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 RAD51DO75771 328 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 DCTN3O75935 186 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 ITGA5P08648 1049 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 ZNF43P17038 809 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 GGT1P19440 569 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 IST1P53990 364 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 TAS2R41P59536 307 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 IL1RL1Q01638 556 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 LGALS3BPQ08380 585 aa13.73□□□□□ -0.21
HMGA1-206ENST00000478214 PIN1Q13526 163 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms