RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CRNNQ9UBG3 495 aaPredicted RBP14.54□□□□□ -0.08
TRIM13-208ENST00000478111 P2RX2Q9UBL9 471 aa14.54□□□□□ -0.08
TRIM13-208ENST00000478111 ZNF443Q9Y2A4 671 aaPredicted RBP14.54□□□□□ -0.08
TRIM13-208ENST00000478111 ARPC4-TTLL3A0A0A6YYG9 625 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 SLC35F4A4IF30 521 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 HDAC3O15379 428 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 LMX1BO60663 402 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 UPK3AO75631 287 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 IL6P05231 212 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 BCHEP06276 602 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 ZCCHC18P0CG32 403 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 IGFBP5P24593 272 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 SERPINF1P36955 418 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 NR4A2P43354 598 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 PDLIM4P50479 330 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 EGR4Q05215 589 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 ADIPOQQ15848 244 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 KRTAP24-1Q3LI83 254 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 GTDC1Q4AE62 458 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 RPS26P11Q5JNZ5 115 aaPredicted RBP14.53□□□□□ -0.08
TRIM13-208ENST00000478111 ANKRD16Q6P6B7 361 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 ABHD12BQ7Z5M8 362 aaPredicted RBP14.53□□□□□ -0.08
TRIM13-208ENST00000478111 SERPINA11Q86U17 422 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 MAGEE2Q8TD90 523 aaPredicted RBP14.53□□□□□ -0.08
TRIM13-208ENST00000478111 VPS33AQ96AX1 596 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 ALKBH3Q96Q83 286 aaPredicted RBP14.53□□□□□ -0.08
TRIM13-208ENST00000478111 ZBTB18Q99592 522 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 KATNB1Q9BVA0 655 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 PTDSS2Q9BVG9 487 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 TAPBPLQ9BX59 468 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 RSPO3Q9BXY4 272 aaPredicted RBP14.53□□□□□ -0.08
TRIM13-208ENST00000478111 SEC61A2Q9H9S3 476 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 TPT1P8Q9HAU6 139 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 CA10Q9NS85 328 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 CALML5Q9NZT1 146 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 LPAR3Q9UBY5 353 aa14.53□□□□□ -0.08
TRIM13-208ENST00000478111 IGHV4-61A0A0C4DH41 118 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 ZNF587BE7ETH6 402 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 NDUFS8O00217 210 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 SLC22A3O75751 556 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 ZNF432O94892 652 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 IGLV1-44P01699 117 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 CALCRP30988 508 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 THBS2P35442 1172 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 CRATP43155 626 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 GZMKP49863 264 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 CRISP3P54108 245 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 DSTNP60981 165 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 COPZ1P61923 177 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 TUBA1BP68363 451 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 TUBA4AP68366 448 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 NAAAQ02083 359 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 GGTLC2Q14390 218 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 PDCD4Q53EL6 469 aaKnown RBP14.52□□□□□ -0.09
TRIM13-208ENST00000478111 CEP85LQ5SZL2 805 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 PRAMEF8Q5VWM4 474 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 PRAMEF7Q5VXH5 474 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 TUBA1AQ71U36 451 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 KDM8Q8N371 416 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 ANKS4BQ8N8V4 417 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 STK35Q8TDR2 534 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 MSI2Q96DH6 328 aaKnown RBP14.52□□□□□ -0.09
TRIM13-208ENST00000478111 TMEM19Q96HH6 336 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 MAELQ96JY0 434 aaKnown RBP14.52□□□□□ -0.09
TRIM13-208ENST00000478111 FOXN4Q96NZ1 517 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 PAIP2Q9BPZ3 127 aaKnown RBP14.52□□□□□ -0.09
TRIM13-208ENST00000478111 SPATA9Q9BWV2 254 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 PARD6BQ9BYG5 372 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 LINC00470Q9BZP3 86 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 SHARPINQ9H0F6 387 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 CENPHQ9H3R5 247 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 THAP1Q9NVV9 213 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 RASD1Q9Y272 281 aa14.52□□□□□ -0.09
TRIM13-208ENST00000478111 A0A096LPE4 126 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 A0A096LPI6 279 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 A0A0G2JPF8 293 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 A0A1W2PPZ6 126 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 TRPC5OSA6NMA1 111 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 HNRNPCL2B2RXH8 293 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 HNRNPCL3B7ZW38 293 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 B9A039 149 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 HNRNPCL1O60812 293 aaKnown RBP14.51□□□□□ -0.09
TRIM13-208ENST00000478111 FZD7O75084 574 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 KRT33AO76009 404 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 CRYAAP02489 173 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 CECR9P0C854 216 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 HNRNPCL4P0DMR1 293 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 PNMTP11086 282 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 PAX7P23759 505 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 SNRPD2P62316 118 aaKnown RBP14.51□□□□□ -0.09
TRIM13-208ENST00000478111 HOXC5Q00444 222 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 LARS2Q15031 903 aaKnown RBP14.51□□□□□ -0.09
TRIM13-208ENST00000478111 EFNB3Q15768 340 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 ZSWIM7Q19AV6 140 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 C3orf36Q3SXR2 165 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 SLC9B1Q4ZJI4 515 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 NIPAL3Q6P499 406 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 MYPOPQ86VE0 399 aaPredicted RBP14.51□□□□□ -0.09
TRIM13-208ENST00000478111 MFSD8Q8NHS3 518 aa14.51□□□□□ -0.09
TRIM13-208ENST00000478111 ZNF317Q96PQ6 595 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms