RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	DOK6	Q6PKX4	331 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC36A4	Q6YBV0	504 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACOT7L	Q6ZUV0	252 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CAMKMT	Q7Z624	323 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GLCCI1	Q86VQ1	547 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	MARCH9	Q86YJ5	346 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SDR9C7	Q8NEX9	313 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR5T3	Q8NGG3	340 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR56B1	Q8NGI3	324 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR6B3	Q8NGW1	331 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2G2	Q8NGZ5	317 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR56A3	Q8NH54	315 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	UBA3	Q8TBC4	463 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PIGX	Q8TBF5	258 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	THEM6	Q8WUY1	208 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAB40A	Q8WXH6	277 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SORCS1	Q8WY21	1168 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	RSC1A1	Q92681	617 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TADA1	Q96BN2	335 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	S100PBP	Q96BU1	408 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRPL38	Q96DV4	380 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CMTM7	Q96FZ5	175 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	HPDL	Q96IR7	371 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF668	Q96K58	619 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF558	Q96NG5	402 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC2A13	Q96QE2	648 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PANX1	Q96RD7	426 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	KCNA7	Q96RP8	456 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TEAD3	Q99594	435 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FUZ	Q9BT04	418 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFAF3	Q9BU61	184 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF426	Q9BUY5	554 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FICD	Q9BVA6	458 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	C1QTNF6	Q9BXI9	259 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHST5	Q9GZS9	411 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	EXO5	Q9H790	373 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	LMAN1L	Q9HAT1	526 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ASCL3	Q9NQ33	180 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	EXOSC3	Q9NQT5	275 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	UQCC1	Q9NVA1	299 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM248	Q9NWD8	314 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	KLHL9	Q9P2J3	617 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	KCND3	Q9UK17	655 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FBXW11	Q9UKB1	542 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	UTS2R	Q9UKP6	389 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PADI3	Q9ULW8	664 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PIN4	Q9Y237	131 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	PCDHB1	Q9Y5F3	818 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	WIF1	Q9Y5W5	379 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ENPP4	Q9Y6X5	453 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	CIT	O14578	2027 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	TTC3	P53804	2025 aa		4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF638	Q14966	1978 aa	Known RBP	4.33	□□□□□ -1.72
PTCD3-212	ENST00000477520	FXYD6-FXYD2	A0A087WZ82	144 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520		A0A1W2PN81	502 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	GNG14	A0A1W2PPG7	69 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	KRTAP23-1	A1A580	65 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	POM121B	A6NF01	834 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	SIGLEC5	O15389	551 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PPIH	O43447	177 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TLR5	O60602	858 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TSPAN2	O60636	221 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARL6IP5	O75915	188 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PMS2P2	O95744	297 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	AIFM1	O95831	613 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	FGB	P02675	491 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CXCL10	P02778	98 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	FGF1	P05230	155 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD1A	P06126	327 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ITGA5	P08648	1049 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANXA5	P08758	320 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR8U8	P0C7N1	319 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	STAG3L1	P0CL83	205 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	NDUFB7	P17568	137 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	HLA-G	P17693	338 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	HLA-DPA1	P20036	260 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAB5A	P20339	215 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBXA2R	P21731	343 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	LPO	P22079	712 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	IDS	P22304	550 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MST1	P26927	711 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PBLD	P30039	288 aa	Predicted RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	PPP2R1B	P30154	601 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD52	P31358	61 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHRNA7	P36544	502 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	MAGEB1	P43366	347 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CAV2	P51636	162 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	CCR6	P51684	374 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	STC1	P52823	247 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	WNT3	P56703	355 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBX4	P57082	545 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	KRTAP10-9	P60411	292 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	ERVPABLB-1	P60509	514 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RAP1B	P61224	184 aa		4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPS25	P62851	125 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPL38	P63173	70 aa	Known RBP	4.32	□□□□□ -1.72
PTCD3-212	ENST00000477520	HSD11B2	P80365	405 aa		4.32	□□□□□ -1.72

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