RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 VGLL4Q14135 290 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 GPNMBQ14956 572 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 PSG5Q15238 335 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 DPYSL2Q16555 572 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 DUSP7Q16829 419 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 CCDC152Q4G0S7 254 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 CFAP157Q5JU67 520 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 MARCH8Q5T0T0 291 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 GPR157Q5UAW9 335 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 NLRP9Q7RTR0 991 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF546Q86UE3 836 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 PAQR7Q86WK9 346 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 VSTM4Q8IW00 320 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF786Q8N393 782 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 TEX9Q8N6V9 391 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ACOT4Q8N9L9 421 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 MFSD9Q8NBP5 474 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 MDS2Q8NDY4 140 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 MARCH1Q8TCQ1 289 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ACER1Q8TDN7 264 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 UFD1Q92890 307 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 EMG1Q92979 244 aaKnown RBP2.1□□□□□ -2.07
TARDBP-208ENST00000477447 RNF185Q96GF1 192 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ITCHQ96J02 903 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 FCRL1Q96LA6 429 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 CCL28Q9NRJ3 127 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 QPCTLQ9NXS2 382 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 KCNIP1Q9NZI2 227 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 EPS15L1Q9UBC2 864 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 BLOC1S6Q9UL45 172 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 ATP6V0A2Q9Y487 856 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 DDX49Q9Y6V7 483 aaKnown RBP2.1□□□□□ -2.07
TARDBP-208ENST00000477447 RLFQ13129 1914 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 CDC42BPBQ9Y5S2 1711 aa2.1□□□□□ -2.07
TARDBP-208ENST00000477447 NKX2-6A6NCS4 301 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 TMX2-CTNND1H3BSU7 103 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 MAGEB4O15481 346 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-208ENST00000477447 RAMP3O60896 148 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 RHOBTB1O94844 696 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 ZNF44P15621 663 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 CMA1P23946 247 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 LHX2P50458 406 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 CCR6P51684 374 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 ACVR1Q04771 509 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 FGL1Q08830 312 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 OXA1LQ15070 435 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 CYTH1Q15438 398 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 KLHL38Q2WGJ6 581 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 LRRC10Q5BKY1 277 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 TFDP3Q5H9I0 405 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 C1orf220Q5T0J3 134 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 PDZK1Q5T2W1 519 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 Q6ZPB1 254 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-208ENST00000477447 GMCL1P1Q8NEA9 526 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 OR6X1Q8NH79 312 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 UBE2E3Q969T4 207 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 CXorf40BQ96DE9 158 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 RBM14Q96PK6 669 aaKnown RBP2.09□□□□□ -2.07
TARDBP-208ENST00000477447 SLC38A2Q96QD8 506 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 HDHD3Q9BSH5 251 aaPredicted RBP2.09□□□□□ -2.07
TARDBP-208ENST00000477447 ZSCAN5AQ9BUG6 496 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 SRMSQ9H3Y6 488 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 YY1AP1Q9H869 796 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 BFARQ9NZS9 450 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 DEC1Q9P2X7 70 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 PTBP2Q9UKA9 531 aaKnown RBP2.09□□□□□ -2.07
TARDBP-208ENST00000477447 RAB26Q9ULW5 256 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 TRAPPC4Q9Y296 219 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 SLC25A15Q9Y619 301 aa2.09□□□□□ -2.07
TARDBP-208ENST00000477447 NACAE9PAV3 2078 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 A0A0G2JN53 185 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 IGHV3-64DA0A0J9YX35 117 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 RIPK2O43353 540 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 PRKAB2O43741 272 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 MTX2O75431 263 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 SLC25A27O95847 323 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 PLEKP08567 350 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-208ENST00000477447 NCK1P16333 377 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 IL12AP29459 219 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 CCR1P32246 355 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 DDOSTP39656 456 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 SPIBQ01892 262 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 EBI3Q14213 229 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 GGTLC2Q14390 218 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 KIAA0087Q14695 138 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 SFT2D3Q587I9 215 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 OR4F3Q6IEY1 312 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 GALNT17Q6IS24 598 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 ZSCAN25Q6NSZ9 544 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 ZNF540Q8NDQ6 660 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 CCDC54Q8NEL0 328 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 IPMKQ8NFU5 416 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 NPBQ8NG41 125 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 OR52H1Q8NGJ2 320 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 UBE2Q2Q8WVN8 375 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 RSPH1Q8WYR4 309 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 STARD4Q96DR4 205 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 FAM210BQ96KR6 192 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms