RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 TFAP2AP05549 437 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HTR1AP08908 422 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HOXD4P09016 255 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 OCM2P0CE71 109 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UBCP0CG48 685 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 MUC1P15941 1255 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 PFKFB1P16118 471 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ZNF18P17022 549 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CEBPBP17676 345 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A4P22310 534 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ITGA3P26006 1051 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PRDX6P30041 224 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC6A1P30531 599 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ADRA1AP35348 466 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A3P35503 534 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UGT1A5P35504 534 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CYLC1P35663 651 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 COILP38432 576 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 MMP12P39900 470 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 STK19P49842 368 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 RPL14P50914 215 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 CNN1P51911 297 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 PLA2G16P53816 162 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 UFM1P61960 85 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ESRRGP62508 458 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HERV-K104P63124 156 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC7A9P82251 487 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PITPNAQ00169 270 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MS4A2Q01362 244 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 DEFA6Q01524 100 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 STX4Q12846 297 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 BNIP2Q12982 314 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC39A6Q13433 755 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ITIH4Q14624 930 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 GANABQ14697 944 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 ARL6IP1Q15041 203 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RNPS1Q15287 305 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC9A3R2Q15599 337 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 VAMP3Q15836 100 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ASTE1Q2TB18 679 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 ZNF658BQ4V348 819 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 XKR7Q5GH72 579 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PIGGQ5H8A4 983 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC35D3Q5M8T2 416 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 AGAP7PQ5VUJ5 663 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ZNF691Q5VV52 312 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 FAM46CQ5VWP2 391 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SYPL2Q5VXT5 272 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RWDD4Q6NW29 188 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 EMBQ6PCB8 327 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PODNL1Q6PEZ8 512 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 DLEU7Q6UYE1 221 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CYHR1Q6ZMK1 362 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 C3P1Q6ZMU1 363 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TMEM182Q6ZP80 229 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 Q6ZPB1 254 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 Q6ZSR9 355 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SCD5Q86SK9 330 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 ADIPOR2Q86V24 386 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 LACC1Q8IV20 430 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CCDC71Q8IV32 467 aaPredicted RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 ARHGAP12Q8IWW6 846 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 BOD1L2Q8IYS8 172 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 HS3ST5Q8IZT8 346 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 LGI2Q8N0V4 545 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLC34A3Q8N130 599 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 GPC2Q8N158 579 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PRSS35Q8N3Z0 413 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 GBGT1Q8N5D6 347 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TEX26Q8N6G2 289 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 BCORP1Q8N888 145 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 OR4D6Q8NGJ1 314 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 OR5H6Q8NGV6 325 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RHEBL1Q8TAI7 183 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MARCH1Q8TCQ1 289 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RNF133Q8WVZ7 376 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 DNAJB3Q8WWF6 145 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SUSD6Q92537 303 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 NRGNQ92686 78 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SEMA4DQ92854 862 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 P2RX5Q93086 422 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLCO4A1Q96BD0 722 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SENP8Q96LD8 212 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TMEM56Q96MV1 263 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 WFIKKN1Q96NZ8 548 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 BIRC8Q96P09 236 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 QKIQ96PU8 341 aaKnown RBP eCLIP2.17□□□□□ -2.062e-27■■■■■ 45.7
XRN1-211ENST00000477237 SLC22A12Q96S37 553 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 NPAS2Q99743 824 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CPNE1Q99829 537 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MED10Q9BTT4 135 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 GGACTQ9BVM4 153 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 RBM24Q9BX46 236 aaKnown RBP2.17□□□□□ -2.06
XRN1-211ENST00000477237 ATG10Q9H0Y0 220 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 PPA2Q9H2U2 334 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 TMEM38AQ9H6F2 299 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 SLA2Q9H6Q3 261 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 CALHM2Q9HA72 323 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 MEAF6Q9HAF1 191 aa2.17□□□□□ -2.06
XRN1-211ENST00000477237 APOBEC3GQ9HC16 384 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms