RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RGRP47804 291 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 APOC4P55056 127 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 IMMTQ16891 758 aaKnown RBP4.16□□□□□ -1.74
VPS50-212ENST00000476413 MICBQ29980 383 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 CCDC14Q49A88 953 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 FHL5Q5TD97 284 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 FAM228AQ86W67 206 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 SLC26A11Q86WA9 606 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 TGIF2LXQ8IUE1 241 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 PIANPQ8IYJ0 282 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 CCDC71LQ8N9Z2 235 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 OR51S1Q8NGJ8 323 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 LINC01006Q8NI28 216 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 RPUSD4Q96CM3 377 aaKnown RBP4.16□□□□□ -1.74
VPS50-212ENST00000476413 CNN2Q99439 309 aaKnown RBP4.16□□□□□ -1.74
VPS50-212ENST00000476413 HIST1H4GQ99525 98 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 FAIM2Q9BWQ8 316 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 TMCO1Q9UM00 188 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 PEX16Q9Y5Y5 336 aa4.16□□□□□ -1.74
VPS50-212ENST00000476413 C1orf105O95561 183 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 CT62P0C5K7 136 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 ZNF19P17023 458 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 IL12AP29459 219 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 GDI1P31150 447 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 GYG1P46976 350 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 KPNA2P52292 529 aaKnown RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 SUCLG1P53597 346 aaKnown RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 ATP5IP56385 69 aaPredicted RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 BEX3Q00994 111 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 TGFBR3Q03167 851 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 SCRN3Q0VDG4 424 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 HERPUD1Q15011 391 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 SAMD4BQ5PRF9 694 aaKnown RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 TIGD3Q6B0B8 471 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 C1orf94Q6P1W5 598 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 PSTKQ8IV42 348 aaKnown RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 NUDCD3Q8IVD9 361 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 TPRX1Q8N7U7 411 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 NECAB1Q8N987 351 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 OR10G3Q8NGC4 313 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 ANKRD49Q8WVL7 239 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 FRAT1Q92837 279 aaPredicted RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 NUS1Q96E22 293 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 ITCHQ96J02 903 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 B3GALT6Q96L58 329 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 MAGEB18Q96M61 343 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 TSG101Q99816 390 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 BTNL2Q9UIR0 455 aa4.15□□□□□ -1.75
VPS50-212ENST00000476413 NAP1L2Q9ULW6 460 aaPredicted RBP4.15□□□□□ -1.75
VPS50-212ENST00000476413 IGLV3-22A0A075B6J6 115 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KIR2DL5BA0A0G2JN68 375 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KIR2DL5BA0A0G2JPC4 375 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 TMEM110-MUSTN1A8MSY1 372 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
VPS50-212ENST00000476413 GOLGA8SH3BPF8 625 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 MMP23AO75900 390 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 OR7A10O76100 309 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 NDUFB10O96000 172 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 CST1P01037 141 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 MMP1P03956 469 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 GNB2P62879 340 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 BST2Q10589 180 aaKnown RBP4.14□□□□□ -1.75
VPS50-212ENST00000476413 ZNF79Q15937 498 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 CASC10Q5T4H9 136 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KDM7AQ6ZMT4 941 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KIR2DL5AQ8N109 375 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 KIR2DL5BQ8NHK3 375 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 SLC2A14Q8TDB8 520 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 MARC2Q969Z3 335 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 PLEKHA8Q96JA3 519 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 P2RY13Q9BPV8 354 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 GPR61Q9BZJ8 451 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 PKIBQ9C010 78 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 LY9Q9HBG7 655 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 NT5MQ9NPB1 228 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 AIG1Q9NVV5 245 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 NEUROG3Q9Y4Z2 214 aa4.14□□□□□ -1.75
VPS50-212ENST00000476413 GOLGA8OA6NCC3 632 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 FAM47DPA6NHR8 397 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 E9PBE3 544 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 GOLGA8NF8WBI6 632 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 SUPT7LO94864 414 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 TMEM50AO95807 157 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 KLK3P07288 261 aaPredicted RBP4.13□□□□□ -1.75
VPS50-212ENST00000476413 CRYGBP07316 175 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 KITLGP21583 273 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 HNRNPH3P31942 346 aaKnown RBP4.13□□□□□ -1.75
VPS50-212ENST00000476413 RBMXP38159 391 aaKnown RBP4.13□□□□□ -1.75
VPS50-212ENST00000476413 VHLP40337 213 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 CRYBB2P43320 205 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 GPM6AP51674 278 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 PLP1P60201 277 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 SELENOTP62341 195 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 ENPEPQ07075 957 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 MRPL28Q13084 256 aaKnown RBP4.13□□□□□ -1.75
VPS50-212ENST00000476413 IDI1Q13907 227 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 IL17AQ16552 155 aa4.13□□□□□ -1.75
VPS50-212ENST00000476413 RSBN1Q5VWQ0 802 aaPredicted RBP4.13□□□□□ -1.75
VPS50-212ENST00000476413 SLC25A48Q6ZT89 311 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms