RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 DCTN6O00399 190 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 OGG1O15527 345 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ZNF264O43296 627 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 PIAS2O75928 621 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SNRPBP14678 240 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 CD53P19397 219 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 GBX2P52951 348 aaPredicted RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SIRPAP78324 504 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 RIN1Q13671 783 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 RNASE12Q5GAN4 147 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 PLET1Q6UQ28 207 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SHISA6Q6ZSJ9 500 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ESPNLQ6ZVH7 1005 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 LRRC28Q86X40 367 aaPredicted RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 C9orf40Q8IXQ3 194 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 GPR135Q8IZ08 494 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SLC43A2Q8N370 569 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 POMGNT2Q8NAT1 580 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ZNF527Q8NB42 609 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 OR7G1Q8NGA0 311 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ADIPOR1Q96A54 375 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 KCNJ15Q99712 375 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 HDHD2Q9H0R4 259 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 NANSQ9NR45 359 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 EML5Q05BV3 1969 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SEC16AO15027 2179 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 IGKV3D-11A0A0A0MRZ8 115 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 HMX3A6NHT5 357 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 KHNYNO15037 678 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ARPC3O15145 178 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 GSTT2BP0CG30 244 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ATF1P18846 271 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 RAB3BP20337 219 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 TACR3P29371 465 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 RORAP35398 523 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 GRK6P43250 576 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 INPP1P49441 399 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ARL4DP49703 201 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 RAB25P57735 213 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 CTXN1P60606 82 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ZNF117Q03924 483 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 TRAM1Q15629 374 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 TATDN3Q17R31 274 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 LINC01590Q5TEZ4 76 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 FAM122BQ7Z309 247 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ZNF563Q8TA94 476 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SLC7A6Q92536 515 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 LCORQ96JN0 433 aaPredicted RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 SLC46A1Q96NT5 459 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 ABHD1Q96SE0 405 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 LPAR4Q99677 370 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 MESP1Q9BRJ9 268 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 PELOQ9BRX2 385 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 MMP25Q9NPA2 562 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 EPHA6Q9UF33 1036 aa12.84□□□□□ -0.35
UBXN11-214ENST00000475591 AK6Q9Y3D8 172 aaKnown RBP12.84□□□□□ -0.35
UBXN11-214ENST00000475591 FAM240BA0A1B0GVZ2 78 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 PRKAR1AP10644 381 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 GALNSP34059 522 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 NR0B1P51843 470 aaKnown RBP12.83□□□□□ -0.36
UBXN11-214ENST00000475591 ACTA2P62736 377 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 ACTG2P63267 376 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 HSD11B2P80365 405 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 CD83Q01151 205 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 ALG10Q5BKT4 473 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 CEP78Q5JTW2 689 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 OTPQ5XKR4 325 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 MARCH3Q86UD3 253 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 ZNF440Q8IYI8 595 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 SLC7A5P1Q8MH63 180 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 LRRC75AQ8NAA5 344 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 HSD17B8Q92506 261 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.36
UBXN11-214ENST00000475591 ALG12Q9BV10 488 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 KLHDC2Q9Y2U9 406 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 DMDP11532 3685 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.36
UBXN11-214ENST00000475591 GPANK1O95872 356 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 SDHBP21912 280 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 DDOSTP39656 456 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 RPS27P42677 84 aaKnown RBP12.83□□□□□ -0.36
UBXN11-214ENST00000475591 NANOS3P60323 173 aaKnown RBP12.83□□□□□ -0.36
UBXN11-214ENST00000475591 PRPS1P60891 318 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 LGALS3BPQ08380 585 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 NSDHLQ15738 373 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 ZFP69Q49AA0 526 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 TPRA1Q86W33 373 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 SYS1Q8N2H4 156 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 MS4A15Q8N5U1 240 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 CADM4Q8NFZ8 388 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 TAAR8Q969N4 342 aa12.83□□□□□ -0.36
UBXN11-214ENST00000475591 SRA1Q9HD15 236 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms